RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 LIPEQ05469 1076 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CRMP1Q14194 572 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 EIF2B1Q14232 305 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 MAPRE2Q15555 327 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SNAPC1Q16533 368 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SMIM21Q3B7S5 101 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 C9orf66Q5T8R8 295 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 LCN1P1Q5VSP4 162 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 TMEM42Q69YG0 159 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 HAGHLQ6PII5 290 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 BAIAP2L2Q6UXY1 529 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 Q6ZSR3 168 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 RASSF6Q6ZTQ3 369 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 KCTD8Q6ZWB6 473 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 TRPM8Q7Z2W7 1104 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF695Q8IW36 515 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ABHD12Q8N2K0 398 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 LINC00471Q8N535 108 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 COMMD1Q8N668 190 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 FAM86B1Q8N7N1 296 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR8H1Q8NGG4 311 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR8B12Q8NGG6 310 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR8D4Q8NGM9 314 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR4Q3Q8NH05 313 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 OR52J3Q8NH60 311 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 GNPDA2Q8TDQ7 276 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CHPT1Q8WUD6 406 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CORO2AQ92828 525 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 AKR1E2Q96JD6 320 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ATP6V1G3Q96LB4 118 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 NOL4LQ96MY1 436 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DUX3Q96PT4 197 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 TM2D3Q9BRN9 247 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SIKE1Q9BRV8 207 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 C1orf21Q9H246 121 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 TMEM133Q9H2Q1 129 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 NCOR1P1Q9H4R4 102 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 EGLN3Q9H6Z9 239 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DCLRE1BQ9H816 532 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 VIPAS39Q9H9C1 493 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 VCX3AQ9NNX9 186 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DCAF13Q9NV06 445 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DNAJC27Q9NZQ0 273 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 DNAJB9Q9UBS3 223 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF256Q9Y2P7 627 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 FAM32AQ9Y421 112 aaKnown RBP2.74□□□□□ -1.97
LIMA1-206ENST00000550611 SMAD5-AS1Q9Y6J3 95 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 CDH10Q9Y6N8 788 aa2.74□□□□□ -1.97
LIMA1-206ENST00000550611 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 A0A0G2JND7 137 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 hADV38S2A0JD32 116 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PQLC2LA1A4F0 135 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 MEX3AA1L020 520 aaKnown RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 LEUTXA8MZ59 168 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 OOSP1A8MZH6 123 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 SEC14L6B5MCN3 397 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 FAM90A26D6RGX4 464 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 F8VVB4 439 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 F8VWA3 439 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 BUB1B-PAK6H3BSN5 160 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 J3QT63 122 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 BMPR1BO00238 502 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 CCRL2O00421 344 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 NME4O00746 187 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 FGF16O43320 207 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 GADD45GO95257 159 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 HCKP08631 526 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 H2BFMP0C1H6 154 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 IGHV4-30-4P0DP06 118 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PIPP12273 146 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 NCK1P16333 377 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 AZU1P20160 251 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ALOX5APP20292 161 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PRKACBP22694 351 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 HSD11B1P28845 292 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ERP29P30040 261 aaKnown RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 BRS3P32247 399 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 MC5RP33032 325 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 IFNGR2P38484 337 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 CDX1P47902 265 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 INSL3P51460 131 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ISL1P61371 349 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 B2MP61769 119 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ESRRGP62508 458 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PLA2G7Q13093 441 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 IL18R1Q13478 541 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 KIAA0141Q14154 515 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 EBI3Q14213 229 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 TPTE2P1Q5T6R2 138 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 GLYATQ6IB77 296 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 RPL13AP3Q6NVV1 102 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PLBD1Q6P4A8 553 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 TEX38Q6PEX7 206 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ZBTB49Q6ZSB9 765 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ARPINQ7Z6K5 226 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 RTN4RL2Q86UN3 420 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 SPATA24Q86W54 205 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF573Q86YE8 665 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ODF3L1Q8IXM7 274 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms