RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 EDDM3AQ14507 147 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 LILRB1Q8NHL6 650 aaPredicted RBP17.6■□□□□ 0.41
PRDM4-205ENST00000550376 SMIM3Q9BZL3 60 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 TMEM222Q9H0R3 208 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 ZC4H2Q9NQZ6 224 aa17.6■□□□□ 0.41
PRDM4-205ENST00000550376 IGHV3-13P01766 116 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 ITLN1Q8WWA0 313 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 PLPPR2Q96GM1 343 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 SPEF1Q9Y4P9 236 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 HOXD4P09016 255 aaPredicted RBP17.59■□□□□ 0.41
PRDM4-205ENST00000550376 IZUMO4Q1ZYL8 232 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 FIP1L1Q6UN15 594 aaKnown RBP17.59■□□□□ 0.41
PRDM4-205ENST00000550376 ZNF695Q8IW36 515 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 OR52L2PQ8NGH6 319 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 BSCL2Q96G97 398 aaPredicted RBP17.59■□□□□ 0.41
PRDM4-205ENST00000550376 CYTL1Q9NRR1 136 aa17.59■□□□□ 0.41
PRDM4-205ENST00000550376 C1QTNF9BB2RNN3 333 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 IGLV2-14P01704 120 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 TUBG1P23258 451 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 MDH2P40926 338 aaKnown RBP17.58■□□□□ 0.41
PRDM4-205ENST00000550376 LTC4SQ16873 150 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 SPERTQ8NA61 448 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 SHARPINQ9H0F6 387 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 TUBG2Q9NRH3 451 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 TUBD1Q9UJT1 453 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 KCNS2Q9ULS6 477 aa17.58■□□□□ 0.41
PRDM4-205ENST00000550376 C12orf77C9JDV5 145 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 H7C1Q1 480 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 I3L521 148 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 ABCD4O14678 606 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 HKR1P10072 659 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 RRASP10301 218 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 UBA52P62987 128 aaKnown RBP17.58■□□□□ 0.4
PRDM4-205ENST00000550376 GNMTQ14749 295 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 MRGPRGQ86SM5 289 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 SELENOHQ8IZQ5 122 aaKnown RBP17.58■□□□□ 0.4
PRDM4-205ENST00000550376 ZNF835Q9Y2P0 537 aa17.58■□□□□ 0.4
PRDM4-205ENST00000550376 IGHV3-43A0A0B4J1X8 118 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 DPRXA6NFQ7 191 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 DEDDO75618 318 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 THBDP07204 575 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 IGHV3-43DP0DP04 118 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 PSG2P11465 335 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 ZNF16P17020 682 aaPredicted RBP17.57■□□□□ 0.4
PRDM4-205ENST00000550376 SSTR5P35346 364 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 CMTM1Q8IZ96 169 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 GCSAMQ8N6F7 178 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 LRTM2Q8N967 370 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 OR10V1Q8NGI7 309 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 CABLES2Q9BTV7 478 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 MBNL3Q9NUK0 354 aaKnown RBP17.57■□□□□ 0.4
PRDM4-205ENST00000550376 IGKV1D-17A0A075B6S4 117 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 TRGV8A0A0C4DH27 118 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 DEFB108AA8MXU0 73 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 LYL1P12980 280 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 LMO1P25800 156 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 PRDX2P32119 198 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 SMIM21Q3B7S5 101 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 ZNRF1Q8ND25 227 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 MEGF10Q96KG7 1140 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 MAGT1Q9H0U3 335 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 DNAJB11Q9UBS4 358 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 GLS2Q9UI32 602 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 WIPI2Q9Y4P8 454 aa17.57■□□□□ 0.4
PRDM4-205ENST00000550376 K7EPK0 472 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 ACAA1P09110 424 aaPredicted RBP17.56■□□□□ 0.4
PRDM4-205ENST00000550376 SELLP14151 372 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 NUP62P37198 522 aaPredicted RBP17.56■□□□□ 0.4
PRDM4-205ENST00000550376 TOR2AQ5JU69 321 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 KRBOX4Q5JUW0 171 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 FAM71E2Q8N5Q1 922 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 OR13A1Q8NGR1 328 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 DCAF16Q9NXF7 216 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 AUP1Q9Y679 476 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 TMEM30CPA0ZSE6 113 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 ADAM20O43506 726 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 ASCL1P50553 236 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 DEFB108BQ8NET1 73 aa17.56■□□□□ 0.4
PRDM4-205ENST00000550376 LGALS8O00214 317 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 IGHV3-7P01780 117 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 HEXAP06865 529 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 RPL12P30050 165 aaKnown RBP17.55■□□□□ 0.4
PRDM4-205ENST00000550376 BSPH1Q075Z2 132 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 AANATQ16613 207 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 ADAM5Q6NVV9 412 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 TMED6Q8WW62 240 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 A0A1B0GW55 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 HBZP02008 142 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L2P0CJ85 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L3P0CJ86 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L4P0CJ87 422 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L5P0CJ88 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L6P0CJ89 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L7P0CJ90 424 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 PET100P0DJ07 73 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 CXorf66Q5JRM2 361 aaPredicted RBP17.55■□□□□ 0.4
PRDM4-205ENST00000550376 RPL7L1Q6DKI1 246 aaKnown RBP17.55■□□□□ 0.4
PRDM4-205ENST00000550376 DUX4L9Q6RFH8 374 aaPredicted RBP17.55■□□□□ 0.4
PRDM4-205ENST00000550376 ERGIC1Q969X5 290 aa17.55■□□□□ 0.4
PRDM4-205ENST00000550376 AQP10Q96PS8 301 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms