RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 HOXB4P17483 251 aaPredicted RBP17.33■□□□□ 0.37
VPS29-206ENST00000549578 DTYMKP23919 212 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 KLF17Q5JT82 389 aaPredicted RBP17.33■□□□□ 0.37
VPS29-206ENST00000549578 UTF1Q5T230 341 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 SUCNR1Q9BXA5 334 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 SESN1Q9Y6P5 492 aa17.33■□□□□ 0.37
VPS29-206ENST00000549578 MEIS3P1A6NDR6 274 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 INAFM1C9JVW0 142 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 RNASEK-C17orf49H0YIS7 233 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 SPINT2O43291 252 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 IGHV4-38-2P0DP08 117 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 COX7A1P24310 79 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 NFYBP25208 207 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 PRSS3P35030 304 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 HLA-DRB3P79483 266 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 HCP5Q6MZN7 132 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 FAM53AQ6NSI3 398 aaPredicted RBP17.32■□□□□ 0.36
VPS29-206ENST00000549578 OR6Q1Q8NGQ2 317 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 ABHD1Q96SE0 405 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 ST6GALNAC5Q9BVH7 336 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 TMEM160Q9NX00 188 aa17.32■□□□□ 0.36
VPS29-206ENST00000549578 NSD1Q96L73 2696 aaPredicted RBP17.32■□□□□ 0.36
VPS29-206ENST00000549578 IGKV1D-8A0A087WSZ0 117 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 POM121CA8CG34 1229 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 FCER2P06734 321 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 SCTP09683 121 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 FPR2P25090 351 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 ZNF554Q86TJ5 538 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 GVQW1Q8N7I0 195 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 TMEM133Q9H2Q1 129 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 MGAT4AQ9UM21 535 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 IGHV3-43A0A0B4J1X8 118 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 CENPVL3A0A0U1RRI6 287 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 A0A1W2PRD5 423 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 A0A1W2PRF3 423 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 A0A1W2PRM7 423 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 TRDCB7Z8K6 153 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 F2RL2O00254 374 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 IGHV3-43DP0DP04 118 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 IL18Q14116 193 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 RNASE12Q5GAN4 147 aaKnown RBP17.31■□□□□ 0.36
VPS29-206ENST00000549578 NCR3LG1Q68D85 454 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 PNKDQ8N490 385 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 NANPQ8TBE9 248 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 IL1F10Q8WWZ1 152 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 LEAP2Q969E1 77 aa17.31■□□□□ 0.36
VPS29-206ENST00000549578 FABP12A6NFH5 140 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 SDCBPO00560 298 aaPredicted RBP17.3■□□□□ 0.36
VPS29-206ENST00000549578 FSHBP01225 129 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 IGHV3-7P01780 117 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 HNF1AP20823 631 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 GPR157Q5UAW9 335 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 OR10A7Q8NGE5 316 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 GALMQ96C23 342 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 OCSTAMPQ9BR26 566 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 HEXA-AS1Q9H8Q6 139 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 RAB9BQ9NP90 201 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
VPS29-206ENST00000549578 FABP7O15540 132 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 LPLP06858 475 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 GSTT2P0CG29 244 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 GSTT2BP0CG30 244 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 KIR2DS4P43632 304 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 LOXL3P58215 753 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 KIR2DS1Q14954 304 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 RUSC1-AS1Q66K80 236 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 OR52W1Q6IF63 320 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 FAM131AQ6UXB0 335 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 CCDC190Q86UF4 302 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 OR52L2PQ8NGH6 319 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 GPX8Q8TED1 209 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 SOSTQ9BQB4 213 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 ZNF286AQ9HBT8 521 aa17.29■□□□□ 0.36
VPS29-206ENST00000549578 IGHV2-26A0A0B4J1V2 119 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 IGKV1-6A0A0C4DH72 117 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 TPPPO94811 219 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 SRP14P37108 136 aaKnown RBP17.28■□□□□ 0.36
VPS29-206ENST00000549578 GNMTQ14749 295 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 SRSF7Q16629 238 aaKnown RBP eCLIP17.28■□□□□ 0.36
VPS29-206ENST00000549578 PYHIN1Q6K0P9 492 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 BRD3OSQ6XYD6 125 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 Q6ZS49 121 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 HOGA1Q86XE5 327 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 OR10V1Q8NGI7 309 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 OR13D1Q8NGV5 346 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 SCPEP1Q9HB40 452 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 IFT46Q9NQC8 304 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 OR2S2Q9NQN1 319 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 GFOD1Q9NXC2 390 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 GNG12Q9UBI6 72 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 V9GYH0 126 aa17.28■□□□□ 0.36
VPS29-206ENST00000549578 FN1P02751 2386 aaKnown RBP17.28■□□□□ 0.36
VPS29-206ENST00000549578 IGHV1-69DA0A0B4J2H0 117 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 IGHV1-69P01742 117 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 CBX5P45973 191 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 UBE2E1P51965 193 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 HERPUD1Q15011 391 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 IGSF11Q5DX21 431 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 ABHD12Q8N2K0 398 aa17.27■□□□□ 0.36
VPS29-206ENST00000549578 BEST4Q8NFU0 473 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms