RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 ETAA1Q9NY74 926 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 TRAPPC2LQ9UL33 140 aa14.83□□□□□ -0.04
CHMP1A-207ENST00000549328 A0A1W2PPE3 182 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 H0YHG0 523 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 CCRL2O00421 344 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 HSD17B6O14756 317 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 SPINT2O43291 252 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 CRTAPO75718 401 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 TMEM11P17152 192 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 GABPB1Q06547 395 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 EBI3Q14213 229 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 HES1Q14469 280 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 TCTEX1D4Q5JR98 221 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 C6orf183Q5T699 404 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 OR4X2Q8NGF9 303 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 PHYHIPQ92561 330 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 CST11Q9H112 138 aa14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 LSM2Q9Y333 95 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 TSSC4Q9Y5U2 329 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-207ENST00000549328 IGHV1-3A0A0C4DH29 117 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 C12orf77C9JDV5 145 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 UBBP0CG47 229 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 SLC35A2P78381 396 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 C9orf152Q5JTZ5 239 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 STEAP3Q658P3 488 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 SIGIRRQ6IA17 410 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 ZNF554Q86TJ5 538 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 C5orf56Q8N8D9 126 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 ST6GALNAC6Q969X2 333 aa14.81□□□□□ -0.04
CHMP1A-207ENST00000549328 TCRBV4S1A1TA0A5B7 111 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 SH2D7A6NKC9 451 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 IGKV1D-33P01593 117 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 IGKV1-33P01594 117 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 CD37P11049 281 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 IL3RAP26951 378 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 AQP4P55087 323 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 GP2P55259 537 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 INSL4Q14641 139 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 IRF3Q14653 427 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 C1orf100Q5SVJ3 147 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 GLT8D1Q68CQ7 371 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 SLC25A48Q6ZT89 311 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 MOB3BQ86TA1 216 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 WFDC9Q8NEX5 89 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 OR4K15Q8NH41 348 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 UBALD1Q8TB05 177 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 NRG4Q8WWG1 115 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 TMED9Q9BVK6 235 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 MBNL3Q9NUK0 354 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 TPRKBQ9Y3C4 175 aa14.8□□□□□ -0.04
CHMP1A-207ENST00000549328 IGHV3-43A0A0B4J1X8 118 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 PDCD6O75340 191 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 IGHV3-43DP0DP04 118 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 RCC1P18754 421 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 SRMP19623 302 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 ZNF137PP52743 207 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 HNF4GQ14541 408 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 MED22Q15528 200 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 FAM27D1Q5T7N8 215 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 LRRTM1Q86UE6 522 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 IZUMO1Q8IYV9 350 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 ZNF439Q8NDP4 499 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 RTN4IP1Q8WWV3 396 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 DUSP21Q9H596 190 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 GNG12Q9UBI6 72 aa14.79□□□□□ -0.04
CHMP1A-207ENST00000549328 A0A1W2PRX2 142 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 UBE2QL1A1L167 161 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 TXNL1O43396 289 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 HBZP02008 142 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 CD1BP29016 333 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 VHLP40337 213 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 REG1BP48304 166 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 CEACAM19Q7Z692 300 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 OR2T10Q8NGZ9 312 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 CHPT1Q8WUD6 406 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 FAM46BQ96A09 425 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 EAF1Q96JC9 268 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 TAF9BQ9HBM6 251 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 KCNIP1Q9NZI2 227 aa14.78□□□□□ -0.04
CHMP1A-207ENST00000549328 PSMB11A5LHX3 300 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 MPIG6BO95866 241 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 IGHG2P01859 326 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 UCHL1P09936 223 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 VSIG8P0DPA2 414 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 PF4V1P10720 104 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 MYF6P23409 242 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 ZNF134P52741 427 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 HSD17B12Q53GQ0 312 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 OXLD1Q5BKU9 147 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 CT45A1Q5HYN5 189 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 RBM48Q5RL73 367 aaKnown RBP14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 FAM53AQ6NSI3 398 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 C10orf99Q6UWK7 81 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 REC114Q7Z4M0 266 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 TGIF2LXQ8IUE1 241 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 Q8N6K4 173 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 OR1L1Q8NH94 360 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 CT45A3Q8NHU0 189 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 KCNG3Q8TAE7 436 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 SGCDQ92629 289 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms