RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF146Q15072 292 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 HFEQ30201 348 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 IGFL2Q6UWQ7 119 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 EP300Q09472 2414 aaPredicted RBP13.15□□□□□ -0.3
BRF1-212ENST00000547562 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 WISP2O76076 250 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 LMO1P25800 156 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
BRF1-212ENST00000547562 ODF3L1Q8IXM7 274 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 CNEP1R1Q8N9A8 125 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 TMEM171Q8WVE6 324 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 AKR1E2Q96JD6 320 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 TRAPPC2LQ9UL33 140 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 A0A0G2JRQ6 117 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 SH2D1BO14796 132 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 CNOT4O95628 575 aaKnown RBP13.14□□□□□ -0.31
BRF1-212ENST00000547562 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 SERPINE2P07093 398 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 PSG2P11465 335 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 SELEP16581 610 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 TESK1Q15569 626 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 OR8G1Q15617 311 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 GUK1Q16774 197 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 PRR18Q8N4B5 295 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 AIFM2Q9BRQ8 373 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 RNF115Q9Y4L5 304 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
BRF1-212ENST00000547562 IGHV3-64DA0A0J9YX35 117 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 H0YL77 283 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 H7C2Y5 167 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 K7N7A8 449 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 AQP7O14520 342 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 CHST1O43916 411 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 NXPH3O95157 252 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 HOXB1P14653 301 aaPredicted RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 NFYBP25208 207 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 PPT1P50897 306 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 BAXQ07812 192 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 PEA15Q15121 130 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 KLF14Q8TD94 323 aaPredicted RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 KPTNQ9Y664 436 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 WRBO00258 174 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 HEXAP06865 529 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 GRPP07492 148 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 SLC25A6P12236 298 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 CBR1P16152 277 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 ATP6V0CP27449 155 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 MPV17P39210 176 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 KIR2DL2P43627 348 aaPredicted RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
BRF1-212ENST00000547562 MBNL3Q9NUK0 354 aaKnown RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 INTS1Q8N201 2190 aaKnown RBP13.13□□□□□ -0.31
BRF1-212ENST00000547562 TRAV17A0A0B4J275 112 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 A0A1B0GU03 582 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 HSPA12AO43301 675 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 CST7O76096 145 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 COX5AP20674 150 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 HOXC12P31275 282 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 DYNLT3P51808 116 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 FLI1Q01543 452 aaPredicted RBP13.12□□□□□ -0.31
BRF1-212ENST00000547562 HMGN3Q15651 99 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 C9orf106Q8NAJ2 232 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 FAM213BQ8TBF2 198 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 EPHA1P21709 976 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 PAX9P55771 341 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 EIF5A2Q9GZV4 153 aaKnown RBP13.12□□□□□ -0.31
BRF1-212ENST00000547562 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 TINAGQ9UJW2 476 aa13.12□□□□□ -0.31
BRF1-212ENST00000547562 MED19A0JLT2 244 aaPredicted RBP13.11□□□□□ -0.31
BRF1-212ENST00000547562 AGFG2O95081 481 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 ACAA1P09110 424 aaPredicted RBP13.11□□□□□ -0.31
BRF1-212ENST00000547562 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 UBALD1Q8TB05 177 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 OBP2BQ9NPH6 170 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 HAND1O96004 215 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 FIP1L1Q6UN15 594 aaKnown RBP13.11□□□□□ -0.31
BRF1-212ENST00000547562 C1orf162Q8NEQ5 155 aaPredicted RBP13.11□□□□□ -0.31
BRF1-212ENST00000547562 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 OR8G5Q8NG78 346 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
BRF1-212ENST00000547562 SARAFQ96BY9 339 aa13.11□□□□□ -0.31
BRF1-212ENST00000547562 PPP1R3CQ9UQK1 317 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms