RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 PSG2P11465 335 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 PMELP40967 661 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 ECI1P42126 302 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 KCNJ3P48549 501 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 FHITP49789 147 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 HLA-DRB3P79483 266 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 SMCO1Q147U7 214 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 TGIF2LYQ8IUE0 185 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 ZCCHC24Q8N2G6 241 aaKnown RBP9.35□□□□□ -0.91
CUX1-212ENST00000547394 ZNF808Q8N4W9 903 aaPredicted RBP9.35□□□□□ -0.91
CUX1-212ENST00000547394 TMEM222Q9H0R3 208 aa9.35□□□□□ -0.91
CUX1-212ENST00000547394 KIR2DS1A0A191URI9 304 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 FAM24AA6NFZ4 105 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 GPR31O00270 319 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 PGLYRP1O75594 196 aaPredicted RBP9.34□□□□□ -0.91
CUX1-212ENST00000547394 TUSC2O75896 110 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 EGR1P18146 543 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SSTR5P35346 364 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 KIR2DS4P43632 304 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 GABRA2P47869 451 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 OR3A1P47881 315 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 CAV2P51636 162 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 KIR2DS1Q14954 304 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 ZNF324BQ6AW86 544 aaPredicted RBP9.34□□□□□ -0.91
CUX1-212ENST00000547394 IGF2-ASQ6U949 168 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 TMEM217Q8N7C4 229 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 CCDC71LQ8N9Z2 235 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 OR52L2PQ8NGH6 319 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 OR10V1Q8NGI7 309 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 AQP10Q96PS8 301 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 BCL2L14Q9BZR8 327 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SHARPINQ9H0F6 387 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SLC25A15Q9Y619 301 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 TSPAN9O75954 239 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 F12P00748 615 aaPredicted RBP9.34□□□□□ -0.91
CUX1-212ENST00000547394 FAM87AP0C7U9 286 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SELLP14151 372 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 CEACAM6P40199 344 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 GLIPR1P48060 266 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 NAAAQ02083 359 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 TESK1Q15569 626 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
CUX1-212ENST00000547394 HSD17B11Q8NBQ5 300 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SUCNR1Q9BXA5 334 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 SLC25A32Q9H2D1 315 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 POLDIP2Q9Y2S7 368 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 CSMD1Q96PZ7 3565 aa9.34□□□□□ -0.91
CUX1-212ENST00000547394 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.92
CUX1-212ENST00000547394 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.92
CUX1-212ENST00000547394 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.92
CUX1-212ENST00000547394 H7C1Q1 480 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 SH2D1BO14796 132 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 CST7O76096 145 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 FGF2P09038 288 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 ZP3P21754 424 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 BTNL3Q6UXE8 466 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.92
CUX1-212ENST00000547394 LRRC29Q8WV35 223 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 PLK3Q9H4B4 646 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 SPACA1Q9HBV2 294 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 OR2W1Q9Y3N9 320 aa9.34□□□□□ -0.92
CUX1-212ENST00000547394 PET100P0DJ07 73 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DEFA5Q01523 94 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 HNF4GQ14541 408 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 IL13RA2Q14627 380 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 ZNF718Q3SXZ3 478 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 IGFL3Q6UXB1 125 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 ZNF497Q6ZNH5 498 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 SPACA3Q8IXA5 215 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 AKAP6Q13023 2319 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 A0A1B0GW55 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 A8MXK9 166 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 TMEM50AO95807 157 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 IGLV2-14P01704 120 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 GLAP06280 429 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L2P0CJ85 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L3P0CJ86 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L4P0CJ87 422 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L5P0CJ88 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L6P0CJ89 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L7P0CJ90 424 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 LYL1P12980 280 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 PPP1CCP36873 323 aaKnown RBP9.33□□□□□ -0.92
CUX1-212ENST00000547394 PLA2G5P39877 138 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 LPAR6P43657 344 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 UCP3P55916 312 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 COL10A1Q03692 680 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 UTF1Q5T230 341 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 C1orf185Q5T7R7 199 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4L9Q6RFH8 374 aaPredicted RBP9.33□□□□□ -0.92
CUX1-212ENST00000547394 DMBX1Q8NFW5 382 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 RNASE11Q8TAA1 199 aaKnown RBP9.33□□□□□ -0.92
CUX1-212ENST00000547394 DCAF16Q9NXF7 216 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 TAAR3PQ9P1P4 343 aa9.33□□□□□ -0.92
CUX1-212ENST00000547394 DUX4Q9UBX2 424 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms