RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OPN1MWP04001 364 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OPN1MW2P0DN77 364 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OPN1MW3P0DN78 364 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR13C7P0DN81 318 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 CTLA4P16410 223 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 FGF7P21781 194 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ZP1P60852 638 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 C20orf196Q8IYI0 205 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 KCNRGQ8N5I3 272 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 CLEC18CQ8NCF0 446 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 FKBP11Q9NYL4 201 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SIGLEC7Q9Y286 467 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 IGHV1-45A0A0A0MS14 117 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SAPCD1Q5SSQ6 148 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 DGAT2L7PQ6IED9 249 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 WFDC3Q8IUB2 231 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 C1orf174Q8IYL3 243 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 GPX8Q8TED1 209 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A28Q96A46 364 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ARHGDIGQ99819 225 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 OR2J1Q9GZK6 312 aa7.51□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF724A8MTY0 619 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 RNASEK-C17orf49H0YIS7 233 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 GPANK1O95872 356 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 CALCRP30988 508 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 DCTDP32321 178 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 GLDNQ6ZMI3 551 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 RASL12Q9NYN1 266 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A10Q9UBX3 287 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 CACNA1DQ01668 2161 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 UBE2CO00762 179 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 FOXH1O75593 365 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 PMS2P2O95744 297 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF17P17021 662 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 MGAT2Q10469 447 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF716A6NP11 495 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 PYCARD-AS1I3L0S3 204 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A1P53007 311 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 PIGPP57054 158 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 LSM6P62312 80 aaKnown RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 LBHQ53QV2 105 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 GGNBP1Q5YKI7 109 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 JMJD8Q96S16 334 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 WNT5BQ9H1J7 359 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 OR51I2Q9H344 312 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 OPN4Q9UHM6 478 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 ZAR1LA6NP61 321 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 CST2P09228 141 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 MDH2P40926 338 aaKnown RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 DHODHQ02127 395 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
CLIP1-218ENST00000545889 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 MAGT1Q9H0U3 335 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A22Q9H936 323 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A19Q9HC21 320 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 HILPDAQ9Y5L2 63 aa7.5□□□□□ -1.21
CLIP1-218ENST00000545889 NTN3O00634 580 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 SIAH2O43255 324 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 GFRA1P56159 465 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 TNFRSF9Q07011 255 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ZFP36L1Q07352 338 aaKnown RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 AWAT1Q58HT5 328 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PYY3Q5JQD4 70 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 STAC2Q6ZMT1 411 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 OR13C5Q8NGS8 318 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 OR5B3Q8NH48 314 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 CTHRC1Q96CG8 243 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 NEIL1Q96FI4 390 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 LPAR3Q9UBY5 353 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 KCNE5Q9UJ90 142 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PLXNB3Q9ULL4 1909 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PCDH15Q96QU1 1955 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF354AO60765 605 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PDCD6O75340 191 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 UBE2KP61086 200 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 OR2F1Q13607 317 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF239Q16600 458 aaKnown RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PHYHD1Q5SRE7 291 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 UNQ9370/PRO34162Q6UXP9 181 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 SEC11CQ9BY50 192 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 CHRNA10Q9GZZ6 450 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF331Q9NQX6 463 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PSENENQ9NZ42 101 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 ZDHHC8Q9ULC8 765 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 SERTM2A0A1B0GWG4 89 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 C7orf77A4D0Y5 90 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 HMSDA8MTL9 139 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 J3QT63 122 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 SSSCA1O60232 199 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 LOXL3P58215 753 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 BCL2L2Q92843 193 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms