RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MPZP25189 248 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 NFYBP25208 207 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 ETV1P50549 477 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 WNT4P56705 351 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 ZP1P60852 638 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 KCTD21Q4G0X4 260 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 TP53I3Q53FA7 332 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 RPL22L1Q6P5R6 122 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 Q8N6K4 173 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 TTTY10Q9BZA0 68 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 COMMD4Q9H0A8 199 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 PCDHB16Q9NRJ7 776 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 GTF2A1LQ9UNN4 478 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 A0A087X0M5 115 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 A0A1B0GX30 115 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 NUPR2A6NF83 97 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR32B1ATL7 298 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 HAND1O96004 215 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 ISG15P05161 165 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 CALCBP10092 127 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 OR3A1P47881 315 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 GLIPR1P48060 266 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 RIPPLY1Q0D2K3 151 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 ALKBH1Q13686 389 aaKnown RBP11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 COMMD2Q86X83 199 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 ANKRD13BQ86YJ7 626 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 NANOGP1Q8N7R0 232 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 OR2G2Q8NGZ5 317 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 THRSPQ92748 146 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 UBR4Q5T4S7 5183 aa11.74□□□□□ -0.53
CLSTN3-216ENST00000545663 A6NIN4 97 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 MGST3O14880 152 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 IGF1P05019 195 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 RAB9AP51151 201 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 EBI3Q14213 229 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 TBCEQ15813 527 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 LGALS9CQ6DKI2 356 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 CORO2AQ92828 525 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 NR1H4Q96RI1 486 aaPredicted RBP11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 TOLLIPQ9H0E2 274 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 PLEKHA3Q9HB20 300 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 VCX3AQ9NNX9 186 aa11.73□□□□□ -0.53
CLSTN3-216ENST00000545663 TRBV2A0A0J9YWF9 115 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 J3QR06 171 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 MAGEB4O15481 346 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 SYT7O43581 403 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 DHRS3O75911 302 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 IGLV1-40P01703 118 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 IGLV3-1P01715 115 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 TTRP02766 147 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 CD1AP06126 327 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 CCL1P22362 96 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 ERP29P30040 261 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 REG1BP48304 166 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 AESQ08117 197 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 IL24Q13007 206 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 IRF3Q14653 427 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 SPHARQ15513 63 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 C17orf58Q2M2W7 97 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 MOB3BQ86TA1 216 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 OR4D6Q8NGJ1 314 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 OR5AK2Q8NH90 309 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 OR51E1Q8TCB6 317 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 CASTOR1Q8WTX7 329 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 CEP19Q96LK0 163 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 S1PR3Q99500 378 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 ISG20L2Q9H9L3 353 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 NEK6Q9HC98 313 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 GPR84Q9NQS5 396 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 ING3Q9NXR8 418 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 TAS2R3Q9NYW6 316 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 CLEC2DQ9UHP7 191 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 STUB1Q9UNE7 303 aa11.72□□□□□ -0.53
CLSTN3-216ENST00000545663 OGG1O15527 345 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 SERPINA3P01011 423 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 MADCAM1Q13477 382 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 CDK5R1Q15078 307 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 OR2G6Q5TZ20 316 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 ZNF773Q6PK81 442 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 Q6ZSR3 168 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 OR8H3Q8N146 312 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 SMIM19Q96E16 107 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 PLEKHA1Q9HB21 404 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 PAK1IP1Q9NWT1 392 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms