RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PF4P02776 101 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 EBI3Q14213 229 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 FOXB2Q5VYV0 432 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 RAB12Q6IQ22 244 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 ZNF329Q86UD4 541 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 Q8N6K4 173 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 ZNF439Q8NDP4 499 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 BPIFB6Q8NFQ5 453 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 Q96M66 194 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 ETAA1Q9NY74 926 aa16.71■□□□□ 0.27
SCARB1-210ENST00000545493 SC5DO75845 299 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 MGMTP16455 207 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 VHLP40337 213 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 INSL4Q14641 139 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 SYT6Q5T7P8 510 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-210ENST00000545493 SIGIRRQ6IA17 410 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 ETV3LQ6ZN32 361 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 CDH26Q8IXH8 852 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 NANOGP1Q8N7R0 232 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 NKAIN3Q8N8D7 197 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 OR4K15Q8NH41 348 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 RTN4IP1Q8WWV3 396 aaPredicted RBP16.7■□□□□ 0.26
SCARB1-210ENST00000545493 ST6GALNAC6Q969X2 333 aa16.7■□□□□ 0.26
SCARB1-210ENST00000545493 MRPS24Q96EL2 167 aaKnown RBP16.7■□□□□ 0.26
SCARB1-210ENST00000545493 MCRIP1C9JLW8 97 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 CRTAPO75718 401 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-210ENST00000545493 GAPDHP04406 335 aaKnown RBP16.69■□□□□ 0.26
SCARB1-210ENST00000545493 Q3ZCU0 254 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 MOB3BQ86TA1 216 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 OR10V1Q8NGI7 309 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 OR1L1Q8NH94 360 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 MRAPQ8TCY5 172 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 SGCDQ92629 289 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 RBMXL1Q96E39 390 aaKnown RBP16.69■□□□□ 0.26
SCARB1-210ENST00000545493 EAF1Q96JC9 268 aaPredicted RBP16.69■□□□□ 0.26
SCARB1-210ENST00000545493 SELENOIQ9C0D9 397 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 LINC00527Q9UJ94 153 aa16.69■□□□□ 0.26
SCARB1-210ENST00000545493 FAM90A10PA6NDY2 464 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 FAM90A7PA6NKC0 464 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 FAM90A23PA8MXZ1 464 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 IGHG2P01859 326 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 GP2P55259 537 aaKnown RBP16.68■□□□□ 0.26
SCARB1-210ENST00000545493 RPL23AP62750 156 aaKnown RBP16.68■□□□□ 0.26
SCARB1-210ENST00000545493 C6orf183Q5T699 404 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 SLC25A48Q6ZT89 311 aaKnown RBP16.68■□□□□ 0.26
SCARB1-210ENST00000545493 C18orf65Q6ZTR6 163 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 TRAPPC2LQ9UL33 140 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 PEX16Q9Y5Y5 336 aa16.68■□□□□ 0.26
SCARB1-210ENST00000545493 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 ANKRD65E5RJM6 399 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 HBZP02008 142 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 RCC1P18754 421 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-210ENST00000545493 IL3RAP26951 378 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 MAPK3P27361 379 aaPredicted RBP16.67■□□□□ 0.26
SCARB1-210ENST00000545493 ZNF134P52741 427 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 ZNF137PP52743 207 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 SLC35A2P78381 396 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 FAM27D1Q5T7N8 215 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 SLC35E3Q7Z769 313 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 PRR18Q8N4B5 295 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 LINC00482Q8N8I6 264 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 CHPT1Q8WUD6 406 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 THRSPQ92748 146 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 FAM46BQ96A09 425 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 UQCC2Q9BRT2 126 aa16.67■□□□□ 0.26
SCARB1-210ENST00000545493 LSM2Q9Y333 95 aaKnown RBP16.67■□□□□ 0.26
SCARB1-210ENST00000545493 ZNF736B4DX44 427 aaPredicted RBP16.66■□□□□ 0.26
SCARB1-210ENST00000545493 CDK1P06493 297 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 GPR50Q13585 617 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 TMEM30BQ3MIR4 351 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 C6orf141Q5SZD1 244 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 RNLSQ5VYX0 342 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 TGIF2LXQ8IUE1 241 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 STPG2Q8N412 459 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 Q8N9W7 124 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 MRPL30Q8TCC3 161 aaKnown RBP16.66■□□□□ 0.26
SCARB1-210ENST00000545493 MND1Q9BWT6 205 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 MBNL3Q9NUK0 354 aaKnown RBP16.66■□□□□ 0.26
SCARB1-210ENST00000545493 GNG12Q9UBI6 72 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 ERGIC3Q9Y282 383 aa16.66■□□□□ 0.26
SCARB1-210ENST00000545493 UBE2QL1A1L167 161 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 LINC01548A6NM66 108 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 SPINT2O43291 252 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 PDCD6O75340 191 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 GPR12P47775 334 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 GABPB1Q06547 395 aaPredicted RBP16.65■□□□□ 0.26
SCARB1-210ENST00000545493 GNMTQ14749 295 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 CT45A1Q5HYN5 189 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 TRAT1Q6PIZ9 186 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 OR2W3Q7Z3T1 314 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 C5orf24Q7Z6I8 188 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 LRRTM1Q86UE6 522 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 OR2T10Q8NGZ9 312 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 CT45A3Q8NHU0 189 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 RCC1LQ96I51 464 aaKnown RBP16.65■□□□□ 0.26
SCARB1-210ENST00000545493 KCNK15Q9H427 330 aa16.65■□□□□ 0.26
SCARB1-210ENST00000545493 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
SCARB1-210ENST00000545493 TXNL1O43396 289 aa16.64■□□□□ 0.25
SCARB1-210ENST00000545493 CA11O75493 328 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms