RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 C14orf105Q9NVL8 296 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 RBFOX1Q9NWB1 397 aaKnown RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 DHCR7Q9UBM7 475 aaKnown RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SLC23A2Q9UGH3 650 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 C3orf18Q9UK00 162 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 KLF13Q9Y2Y9 288 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SIGLEC9Q9Y336 463 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 HYOU1Q9Y4L1 999 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 ATP6V1DQ9Y5K8 247 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 WSB1Q9Y6I7 421 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 TLN2Q9Y4G6 2542 aa2.64□□□□□ -1.99
SNHG1-222ENST00000545308 SCN3AQ9NY46 2000 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 DNHD1Q96M86 4753 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 IGLV1-50A0A075B6I6 118 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 IGHV2OR16-5A0A0B4J2B6 119 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 GOLGA8QA0A0J9YX86 632 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 A0A0J9YY10 115 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 SEC14L6B5MCN3 397 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 POLR3GO15318 223 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 RPN2P04844 631 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 HTR1DP28221 377 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ARR3P36575 388 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 PPOXP50336 477 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 TAS2R60P59551 318 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 RAP1AP62834 184 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 PPIDQ08752 370 aaKnown RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 STX3Q13277 289 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 C2orf83Q53S99 150 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 FAM27D1Q5T7N8 215 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 KDM4DQ6B0I6 523 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 FAHD1Q6P587 224 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 WDR59Q6PJI9 974 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 LRRC8AQ8IWT6 810 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 RNF175Q8N4F7 328 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ATPAF2Q8N5M1 289 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 OR6N1Q8NGY5 312 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 C15orf40Q8WUR7 153 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 PSMF1Q92530 271 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 RNASE6Q93091 150 aaKnown RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 PTX4Q96A99 478 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 LRRC45Q96CN5 670 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 DCUN1D1Q96GG9 259 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF414Q96IQ9 312 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 TEAD3Q99594 435 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 TSNAXQ99598 290 aaKnown RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 C20orf144Q9BQM9 153 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 TMEM243Q9BU79 118 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 BEX2Q9BXY8 128 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ULBP2Q9BZM5 246 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 DHX35Q9H5Z1 703 aaKnown RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ZNHIT6Q9NWK9 470 aaKnown RBP2.63□□□□□ -1.99
SNHG1-222ENST00000545308 EURLQ9NYK6 297 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 VAX2Q9UIW0 290 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 PSMD13Q9UNM6 376 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 NINQ8N4C6 2090 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ABCA1O95477 2261 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 ZANQ9Y493 2812 aa2.63□□□□□ -1.99
SNHG1-222ENST00000545308 TGP01266 2768 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IGHV1-45A0A0A0MS14 117 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 A0A0U1RQV1 116 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IQCF5A8MTL0 148 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 KRBOX1C9JBD0 128 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 REM1O75628 298 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 BRI3O95415 125 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 TTC4O95801 387 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 CST4P01036 141 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 TRBV12-3P01733 135 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IGHV1-8P0DP01 117 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 MDKP21741 143 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 DTYMKP23919 212 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IL12BP29460 328 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 PRLHRP49683 370 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 ZNF133P52736 654 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 ESRRGP62508 458 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 SKP1P63208 163 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 CRADDP78560 199 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 C2orf80Q0P641 193 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 IHHQ14623 411 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 FBXL19-AS1Q494R0 122 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 TMEM236Q5W0B7 351 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 NIPAL1Q6NVV3 410 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 FAM173BQ6P4H8 233 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 NTM-AS1Q6ZSK4 140 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 RPS19BP1Q86WX3 136 aaKnown RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 LINC00469Q8N7U9 141 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 CDRT4Q8N9R6 151 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 C19orf18Q8NEA5 215 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 OR10Z1Q8NGY1 313 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 OR52P1PQ8NH57 321 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 EXOSC8Q96B26 276 aaKnown RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 C18orf15Q96N68 181 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 RDH12Q96NR8 316 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 HSD17B10Q99714 261 aaKnown RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 SELENOSQ9BQE4 189 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 SLC25A39Q9BZJ4 359 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-222ENST00000545308 OR52D1Q9H346 318 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 C1orf198Q9H425 327 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 PLEKHF2Q9H8W4 249 aa2.62□□□□□ -1.99
SNHG1-222ENST00000545308 SPACA1Q9HBV2 294 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms