RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 LINC00312Q9Y6C7 94 aa10.15□□□□□ -0.78
ACTN1-206ENST00000544964 TRGV10A0A0A0MS01 117 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 HPGDSO60760 199 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 CLPXO76031 633 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 MT-ND4P03905 459 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 HIST1H1DP16402 221 aaKnown RBP10.14□□□□□ -0.79
ACTN1-206ENST00000544964 CDK2P24941 298 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 GLP1RP43220 463 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 DLX6P56179 175 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 DYNC1I2Q13409 638 aaKnown RBP10.14□□□□□ -0.79
ACTN1-206ENST00000544964 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 Q8N7P7 452 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
ACTN1-206ENST00000544964 PHF21AQ96BD5 680 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 DGCR14Q96DF8 476 aaKnown RBP10.14□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 ABCG5Q9H222 651 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 SIRT7Q9NRC8 400 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 ELF5Q9UKW6 265 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-206ENST00000544964 KCNK7Q9Y2U2 307 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 RNF114Q9Y508 228 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 DSCAML1Q8TD84 2053 aa10.14□□□□□ -0.79
ACTN1-206ENST00000544964 TRAV18A0A075B6X5 111 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 A0A1W2PPH5 198 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 A6NHS1 94 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 MFNGO00587 321 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 CTDSP2O14595 271 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF728P0DKX0 622 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 ELK1P19419 428 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 PAX5Q02548 391 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 MADCAM1Q13477 382 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 Q6ZSV7 163 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 C5orf24Q7Z6I8 188 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 C11orf42Q8N5U0 333 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 UBALD1Q8TB05 177 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 SETD6Q8TBK2 473 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 CORO2AQ92828 525 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 S100A16Q96FQ6 103 aaKnown RBP10.13□□□□□ -0.79
ACTN1-206ENST00000544964 CMSS1Q9BQ75 279 aaKnown RBP10.13□□□□□ -0.79
ACTN1-206ENST00000544964 SLIRPQ9GZT3 109 aaKnown RBP10.13□□□□□ -0.79
ACTN1-206ENST00000544964 MMP27Q9H306 513 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 NCOR1P1Q9H4R4 102 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 CHMP1AQ9HD42 196 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-206ENST00000544964 DIABLOQ9NR28 239 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 OR6C3Q9NZP0 311 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 TRAPPC2LQ9UL33 140 aa10.13□□□□□ -0.79
ACTN1-206ENST00000544964 UBE2J1Q9Y385 318 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-206ENST00000544964 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 C17orf98A8MV24 154 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 FAM25AB3EWG3 89 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 FAM25CB3EWG5 89 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 FAM25GB3EWG6 89 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 M0R1W7 72 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 RGS5O15539 181 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 CA11O75493 328 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 MMP23AO75900 390 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 SCGNO76038 276 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 TSPAN15O95858 294 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 APOA1P02647 267 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 CD3GP09693 182 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 PTHLHP12272 177 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 RCC1P18754 421 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-206ENST00000544964 SSTR5P35346 364 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 GDNFP39905 211 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 KLRD1Q13241 179 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 ARFRP1Q13795 201 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF260Q3ZCT1 412 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 PRAMEF5Q5TYX0 476 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF782Q6ZMW2 699 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-206ENST00000544964 Q6ZPA2 131 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 GAPTQ8N292 157 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF565Q8N9K5 539 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 MCFD2Q8NI22 146 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 RFESDQ8TAC1 157 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 TNFRSF14Q92956 283 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 DMRTB1Q96MA1 342 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 CMTM3Q96MX0 182 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 C6orf62Q9GZU0 229 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-206ENST00000544964 MIXL1Q9H2W2 232 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 GAL3ST2Q9H3Q3 398 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 TAS2R3Q9NYW6 316 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 VPREB3Q9UKI3 123 aa10.12□□□□□ -0.79
ACTN1-206ENST00000544964 TET2Q6N021 2002 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-206ENST00000544964 KBTBD11-OT1A0A1B0GTJ5 212 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 TMEM235A6NFC5 223 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 ZNF729A6NN14 1252 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-206ENST00000544964 M0QZ24 198 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 TIMM23O14925 209 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 XRCC3O43542 346 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 NAPSAO96009 420 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 CGB3P0DN86 165 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 CGB7P0DN87 165 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 MRPS15P82914 257 aaKnown RBP10.11□□□□□ -0.79
ACTN1-206ENST00000544964 LTC4SQ16873 150 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 TMEM69Q5SWH9 247 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 BAIAP2L2Q6UXY1 529 aa10.11□□□□□ -0.79
ACTN1-206ENST00000544964 LAX1Q8IWV1 398 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms