RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 EBAG9O00559 213 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MAGEB3O15480 346 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 TXNL1O43396 289 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 DHRS3O75911 302 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF682O95780 498 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 CYB5AP00167 134 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 NPPAP01160 153 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 IFNGP01579 166 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 IFNA4P05014 189 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 CSN2P05814 226 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 LYNP07948 512 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 SPI1P17947 270 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 NFYBP25208 207 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 C21orf33P30042 268 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 TNFSF8P32971 234 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR3A1P47881 315 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 NPBWR2P48146 333 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 SMIM11AP58511 58 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 SSBP2P81877 361 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 APOFQ13790 326 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF146Q15072 292 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 KRT71Q3SY84 523 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM42Q69YG0 159 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 FAM53AQ6NSI3 398 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 FAHD1Q6P587 224 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 LYG2Q86SG7 212 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ERI1Q8IV48 349 aaKnown RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 RDH10Q8IZV5 341 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 CADM3Q8N126 398 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 LINC00471Q8N535 108 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MREGQ8N565 214 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 GVQW1Q8N7I0 195 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 YIPF7Q8N8F6 280 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF565Q8N9K5 539 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MINDY2Q8NBR6 621 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR2T12Q8NG77 320 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR10A7Q8NGE5 316 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR8B12Q8NGG6 310 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OR6N2Q8NGY6 317 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 NTN5Q8WTR8 489 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ANP32BQ92688 251 aaKnown RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MBOAT4Q96T53 435 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 OVOL2Q9BRP0 275 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM109Q9BVC6 243 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 GGTLC1Q9BX51 225 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MFFQ9GZY8 342 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 CST11Q9H112 138 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 SLA2Q9H6Q3 261 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 AAMDCQ9H7C9 122 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 EXOSC4Q9NPD3 245 aaKnown RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 PLSCR3Q9NRY6 295 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 NDE1Q9NXR1 346 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 IDI2-AS1Q9NZ38 188 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 C11orf21Q9P2W6 132 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 RNF150Q9ULK6 438 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 FOXA2Q9Y261 457 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-220ENST00000544550 AP3M1Q9Y2T2 418 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 ENPP4Q9Y6X5 453 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 U3KQV3 271 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 DNAH10Q8IVF4 4471 aa3.07□□□□□ -1.92
SNHG1-220ENST00000544550 LOC102724200A0A096LPH7 203 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-220ENST00000544550 IGHV3-72A0A0B4J1Y9 119 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TRBV2A0A0J9YWF9 115 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TRBV4-1A0A0J9YWV2 114 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM269A0A1B0GVZ9 245 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 A0A1W2PN81 502 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM120BA0PK00 339 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 G3V318 75 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 HSPB6O14558 160 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 SH2D1BO14796 132 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 ATP6V0E1O15342 81 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 AIREO43918 545 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 IGLV3-1P01715 115 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 HLA-DRB1P01911 266 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TFAP2AP05549 437 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF3P17036 446 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 ARL3P36405 182 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 CHRNA7P36544 502 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF45Q02386 682 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 AESQ08117 197 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM267Q0VDI3 215 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TSPAN31Q12999 210 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 DIAPH2-AS1Q14236 149 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 RBMY1FQ15415 496 aaKnown RBP3.06□□□□□ -1.92
SNHG1-220ENST00000544550 MMDQ15546 238 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 C17orf58Q2M2W7 97 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 COQ5Q5HYK3 327 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 KRBOX4Q5JUW0 171 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 SAMD4BQ5PRF9 694 aaKnown RBP3.06□□□□□ -1.92
SNHG1-220ENST00000544550 C10orf25Q5T742 122 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 SLC16A13Q7RTY0 426 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 TRPM8Q7Z2W7 1104 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 FAM58AQ8N1B3 248 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 DEFB125Q8N687 156 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 SLC37A3Q8NCC5 494 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 CHST4Q8NCG5 386 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 OTOSQ8NHW6 89 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms