RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 PRSS58Q8IYP2 241 aa15.65■□□□□ 0.1
CCT4-204ENST00000544079 SPPL3Q8TCT6 385 aa15.65■□□□□ 0.1
CCT4-204ENST00000544079 NAT6Q93015 286 aa15.65■□□□□ 0.1
CCT4-204ENST00000544079 NEIL1Q96FI4 390 aaPredicted RBP15.65■□□□□ 0.1
CCT4-204ENST00000544079 GSX1Q9H4S2 264 aaPredicted RBP15.65■□□□□ 0.1
CCT4-204ENST00000544079 UBE2ZQ9H832 354 aaPredicted RBP15.65■□□□□ 0.1
CCT4-204ENST00000544079 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 IGKV1-27A0A075B6S5 117 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 CCDC163A0A0D9SF12 145 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 DLX2Q07687 328 aaPredicted RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 FAM78BQ5VT40 261 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 CST9LP1Q5W188 147 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 CHRNA10Q9GZZ6 450 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 FOXJ2Q9P0K8 574 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 SLC45A2Q9UMX9 530 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 WIPI2Q9Y4P8 454 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 H3BML4 177 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 TMPRSS2O15393 492 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 DRD1P21728 446 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 NTSR1P30989 418 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 GUCA1AP43080 201 aaPredicted RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 RPP30P78346 268 aaKnown RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 BATFQ16520 125 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 RSPO1Q2MKA7 263 aaPredicted RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 PIGYQ3MUY2 71 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 CARD17Q5XLA6 110 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 RNASE8Q8TDE3 154 aaKnown RBP15.64■□□□□ 0.09
CCT4-204ENST00000544079 KCNE4Q8WWG9 221 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 BORCS8Q96FH0 119 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 ST3GAL6Q9Y274 331 aa15.64■□□□□ 0.09
CCT4-204ENST00000544079 A0A1W2PN81 502 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 M0R135 149 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 CHRNA7P36544 502 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 AARDQ4LEZ3 155 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 RPP25LQ8N5L8 163 aaKnown RBP15.63■□□□□ 0.09
CCT4-204ENST00000544079 TAF15Q92804 592 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCT4-204ENST00000544079 EXTL1Q92935 676 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 SPTSSAQ969W0 71 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 GPR146Q96CH1 333 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 ZNF799Q96GE5 643 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 PAM16Q9Y3D7 125 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 HS3ST3A1Q9Y663 406 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 MYO7BQ6PIF6 2116 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 SHANK1Q9Y566 2161 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 TRAV9-1A0A075B6T8 112 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A10PA6NDY2 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A18PA6NE21 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A16PA6NEW6 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A20PA6NIJ5 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A8PA6NJQ4 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 SLC22A20A6NK97 555 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A7PA6NKC0 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A22PA8MWA6 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A12PA8MX19 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A5PA8MXJ8 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A23PA8MXZ1 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 CTXN2P0C2S0 81 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A15PP0C7V4 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A13PP0C7W8 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A14PP0C7W9 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 FAM90A24PP0C7X0 464 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 TDRG1Q3Y452 100 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 TMEM196Q5HYL7 178 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 C10orf128Q5T292 105 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 Q6ZSR6 202 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 OR2D3Q8NGH3 330 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 OR4F5Q8NH21 305 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 LSM10Q969L4 123 aaKnown RBP15.63■□□□□ 0.09
CCT4-204ENST00000544079 OR4F4Q96R69 305 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 STRADBQ9C0K7 418 aa15.63■□□□□ 0.09
CCT4-204ENST00000544079 BRCA2P51587 3418 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 H3BP45 60 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 SYNGR2O43760 224 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 EFNA2O43921 213 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 TOMM40O96008 361 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 S100GP29377 79 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 RBM11P57052 281 aaKnown RBP15.62■□□□□ 0.09
CCT4-204ENST00000544079 RPS18P62269 152 aaKnown RBP15.62■□□□□ 0.09
CCT4-204ENST00000544079 MRGPRX1Q96LB2 322 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 CIB3Q96Q77 187 aaPredicted RBP15.62■□□□□ 0.09
CCT4-204ENST00000544079 ZNF442Q9H7R0 627 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 PSENENQ9NZ42 101 aa15.62■□□□□ 0.09
CCT4-204ENST00000544079 IGKV1-12A0A0C4DH73 117 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 IGKV1D-12P01611 117 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 ARL16Q0P5N6 197 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 SHBQ15464 509 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 TMEM42Q69YG0 159 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 BRICD5Q6PL45 260 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 ELOVL5Q9NYP7 299 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 SLC33A1O00400 549 aaPredicted RBP15.61■□□□□ 0.09
CCT4-204ENST00000544079 NXPH3O95157 252 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 F2RP25116 425 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 MPLP40238 635 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 CAPZBP47756 277 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 TFPI2P48307 235 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 PTTG1IPP53801 180 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.61■□□□□ 0.09
CCT4-204ENST00000544079 HAPLN4Q86UW8 402 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 OR5AU1Q8NGC0 362 aa15.61■□□□□ 0.09
CCT4-204ENST00000544079 RNF138Q8WVD3 245 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms