RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 BLKP51451 505 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 FUT6P51993 359 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 RPS20P60866 119 aaKnown RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 RAC1P63000 192 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SHBQ15464 509 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 MSMO1Q15800 293 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 CST9LP1Q5W188 147 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 ODF3L1Q8IXM7 274 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 OR4F5Q8NH21 305 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 EXTL1Q92935 676 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 ZNF799Q96GE5 643 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 LIN37Q96GY3 246 aaPredicted RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 LYZL4Q96KX0 146 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 OR4F4Q96R69 305 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 RNF2Q99496 336 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 STRADBQ9C0K7 418 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 WDR61Q9GZS3 305 aaKnown RBP4.3□□□□□ -1.72
LMO3-229ENST00000543721 PSENENQ9NZ42 101 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 B3GAT1Q9P2W7 334 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 SLC45A2Q9UMX9 530 aa4.3□□□□□ -1.72
LMO3-229ENST00000543721 NKX6-3A6NJ46 265 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TRAF3IP2O43734 574 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 PRKNO60260 465 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 TMEM50AO95807 157 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 COX5AP20674 150 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 IL3RAP26951 378 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 RPS18P62269 152 aaKnown RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 SSPNQ14714 243 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ZNF726P1Q15940 193 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 C10orf128Q5T292 105 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TMEM144Q7Z5S9 345 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 PLPPR1Q8TBJ4 325 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 MRGPRDQ8TDS7 321 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 CIB3Q96Q77 187 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 RSG1Q9BU20 258 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SOHLH2Q9NX45 425 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ST3GAL6Q9Y274 331 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 DOCK9Q9BZ29 2069 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 MDFIC2A0A1B0GVS7 189 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 A6NNC1 897 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 METTL12A8MUP2 240 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 F5H5K5 113 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 CD55P08174 381 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 BMP5P22003 454 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 FGF8P55075 233 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 GNB2P62879 340 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 DLX2Q07687 328 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 TMEM249Q2WGJ8 235 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 PLPPR5Q32ZL2 321 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 IGF2-ASQ6U949 168 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 C20orf196Q8IYI0 205 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TCTEX1D1Q8N7M0 179 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ZNF738Q8NE65 137 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 OR5B3Q8NH48 314 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TAF15Q92804 592 aaKnown RBP eCLIP4.29□□□□□ -1.72
LMO3-229ENST00000543721 CORO2AQ92828 525 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ZNF552Q9H707 407 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 ZDHHC11Q9H8X9 412 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SLC7A10Q9NS82 523 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 CDC42EP3Q9UKI2 254 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 LILRA5A6NI73 299 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 C17orf112F2Z3M2 114 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 HS3ST1O14792 307 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 YPEL1O60688 119 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TUSC2O75896 110 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 OR2J2O76002 312 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 CRISP2P16562 243 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 F2RP25116 425 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 CDAP32320 146 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 Q0VG73 95 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 MYBPHQ13203 477 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 NSDHLQ15738 373 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 BATFQ16520 125 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TPTE2P1Q5T6R2 138 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 Q6ZSR6 202 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ZNF709Q8N972 641 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SLC24A4Q8NFF2 622 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SPPL3Q8TCT6 385 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 PATE1Q8WXA2 126 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 SAMD10Q9BYL1 202 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 PATZ1Q9HBE1 687 aaKnown RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 BET1LQ9NYM9 111 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 FOXJ2Q9P0K8 574 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 TAAR3PQ9P1P4 343 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 ADAMTS9Q9P2N4 1935 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 COL5A1P20908 1838 aaPredicted RBP4.29□□□□□ -1.72
LMO3-229ENST00000543721 ARID1AO14497 2285 aa4.29□□□□□ -1.72
LMO3-229ENST00000543721 RNF212BA8MTL3 300 aa4.28□□□□□ -1.72
LMO3-229ENST00000543721 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
LMO3-229ENST00000543721 DEGS1O15121 323 aa4.28□□□□□ -1.72
LMO3-229ENST00000543721 MLNRO43193 412 aa4.28□□□□□ -1.72
LMO3-229ENST00000543721 VAMP5O95183 116 aa4.28□□□□□ -1.72
LMO3-229ENST00000543721 REG1AP05451 166 aa4.28□□□□□ -1.72
LMO3-229ENST00000543721 SELEP16581 610 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms