RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BDP1A6H8Y1 2624 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 CTAG2O75638 210 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 TYMSP04818 313 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 FGF7P21781 194 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 INSL4Q14641 139 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 AVPI1Q5T686 147 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 DMKNQ6E0U4 476 aaPredicted RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5AP2Q8NGF4 316 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 PACRGQ96M98 296 aaPredicted RBP6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 FRRS1LQ9P0K9 344 aa6.01□□□□□ -1.45
SRGAP1-206ENST00000543397 GREB1LQ9C091 1923 aaPredicted RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF724A8MTY0 619 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 MT-ND4LP03901 98 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 PGA3P0DJD8 388 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 PAX6P26367 422 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 S100A4P26447 101 aaKnown RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 POU2AF1Q16633 256 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 LINC00303Q3SY05 128 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 RNF212Q495C1 297 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 Q71RC1 249 aaPredicted RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 C10orf111Q8N326 155 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 ALPK2Q86TB3 2170 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 CKAP5Q14008 2032 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 OR4C45A6NMZ5 311 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 IFNL4K9M1U5 179 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 CST7O76096 145 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 PTHLHP12272 177 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 IL11P20809 199 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 RPS10P46783 165 aaKnown RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 PDZK1IP1Q13113 114 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 TMUB2Q71RG4 321 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 MTFP1Q9UDX5 166 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 ZDHHC8Q9ULC8 765 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 WIPI2Q9Y4P8 454 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 DMRT1Q9Y5R6 373 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 LRRC3CA6NJW4 275 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 TRDCB7Z8K6 153 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 C4orf51C9J302 202 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 C22orf46C9J442 243 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 DEDDO75618 318 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 USF1P22415 310 aaPredicted RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 PMELP40967 661 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 TNFSF10P50591 281 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 IGLV3-21P80748 117 aaPredicted RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 EFNB1P98172 346 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 MMDQ15546 238 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 ZDHHC22Q8N966 263 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 OR4F17Q8NGA8 305 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 OR1K1Q8NGR3 316 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 OR4F5Q8NH21 305 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 ITLN1Q8WWA0 313 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 OR4F4Q96R69 305 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 SRD5A3Q9H8P0 318 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 RASL12Q9NYN1 266 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 ELOVL5Q9NYP7 299 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 GNG13Q9P2W3 67 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 SIPA1L1O43166 1804 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 DIDO1Q9BTC0 2240 aaKnown RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC17A3O00476 420 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 IGKV3-11P04433 115 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 PXT1Q8NFP0 134 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 C2CD4CQ8TF44 421 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 CTHRC1Q96CG8 243 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 SIGLEC12Q96PQ1 595 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 CCL19Q99731 98 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 UQCC1Q9NVA1 299 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 PIPOXQ9P0Z9 390 aa6□□□□□ -1.45
SRGAP1-206ENST00000543397 RCL1Q9Y2P8 373 aaKnown RBP6□□□□□ -1.45
SRGAP1-206ENST00000543397 C3orf85A0A1B0GTC6 90 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 UBE2L5PA0A1B0GUS4 154 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF705FA8MVS1 300 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF705DP0CH99 300 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF705BP0CI00 300 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 CD59P13987 128 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PRDX2P32119 198 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 LSM11P83369 360 aaKnown RBP eCLIP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5I1Q13606 314 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SPACA3Q8IXA5 215 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 MUC15Q8N387 334 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5R1Q8NH85 324 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 LINC01560Q8TB33 94 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PPP1R1CQ8WVI7 109 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 TMED6Q8WW62 240 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 CACNG5Q9UF02 275 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ANXA10Q9UJ72 324 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 POLEQ07864 2286 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 OGG1O15527 345 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 NDUFA2O43678 99 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC25A4P12235 298 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 AKR1C3P42330 323 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SEC61GP60059 68 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 APCDD1LQ8NCL9 501 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF439Q8NDP4 499 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 FLYWCH2Q96CP2 140 aaKnown RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 CCL13Q99616 98 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF331Q9NQX6 463 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 FCN1O00602 326 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SYNGR3O43761 229 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ADAM11O75078 769 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms