RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 RAB40CQ96S21 281 aa20.29■□□□□ 0.84
SHD-201ENST00000543264 MAP1LC3B2A6NCE7 125 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 OR6C6A6NF89 314 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 PPP5D1E7EU14 171 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 TUSC2O75896 110 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 SERPINE2P07093 398 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 F2RP25116 425 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 SLC10A1Q14973 349 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 SHHQ15465 462 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 RPUSD4Q96CM3 377 aaKnown RBP20.28■□□□□ 0.84
SHD-201ENST00000543264 SRXN1Q9BYN0 137 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 MAP1LC3BQ9GZQ8 125 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 TMEM38BQ9NVV0 291 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 IL36RNQ9UBH0 155 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 ARHGAP21Q5T5U3 1957 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 EREGO14944 169 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 NAPSAO96009 420 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 PSG2P11465 335 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 GALR1P47211 349 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 NUTF2P61970 127 aaKnown RBP20.28■□□□□ 0.84
SHD-201ENST00000543264 BEND2Q8NDZ0 799 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 PCGF1Q9BSM1 259 aa20.28■□□□□ 0.84
SHD-201ENST00000543264 KIAA1324LA8MWY0 1029 aaPredicted RBP20.27■□□□□ 0.84
SHD-201ENST00000543264 ZIC3O60481 467 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 GCGP01275 180 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 IFNA1P01562 189 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 BSXQ3C1V8 233 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 FBXO46Q6PJ61 603 aaPredicted RBP20.27■□□□□ 0.84
SHD-201ENST00000543264 WDR74Q6RFH5 385 aaPredicted RBP20.27■□□□□ 0.84
SHD-201ENST00000543264 Q6ZS49 121 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 SYT13Q7L8C5 426 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 ZNF525Q8N782 197 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 DNASE2BQ8WZ79 361 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 IL22RA2Q969J5 263 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 MRPL37Q9BZE1 423 aaKnown RBP20.27■□□□□ 0.84
SHD-201ENST00000543264 AKIRIN1Q9H9L7 192 aaPredicted RBP20.27■□□□□ 0.84
SHD-201ENST00000543264 PSENENQ9NZ42 101 aa20.27■□□□□ 0.84
SHD-201ENST00000543264 IDH3GP51553 393 aaPredicted RBP20.27■□□□□ 0.83
SHD-201ENST00000543264 CASP6P55212 293 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 SLC25A45Q8N413 288 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 OR51G1Q8NGK1 321 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 OR5B12Q96R08 314 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 ELOVL1Q9BW60 279 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 RNF150Q9ULK6 438 aa20.27■□□□□ 0.83
SHD-201ENST00000543264 H7BYZ3 331 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 ZNHIT1O43257 154 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 RTP5Q14D33 572 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 LHX4Q969G2 390 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 PYGO2Q9BRQ0 406 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 A0A1W2PPQ1 181 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 HMGB3O15347 200 aaKnown RBP20.26■□□□□ 0.83
SHD-201ENST00000543264 CCL3P10147 92 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 TCEAL6Q6IPX3 200 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 WNT5BQ9H1J7 359 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 SLC39A9Q9NUM3 307 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 CACNG5Q9UF02 275 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 CEP290O15078 2479 aa20.26■□□□□ 0.83
SHD-201ENST00000543264 PMS2P11Q13670 270 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 PSMG3Q9BT73 122 aaPredicted RBP20.25■□□□□ 0.83
SHD-201ENST00000543264 ZNF391Q9UJN7 358 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 KIR2DS1A0A191URI9 304 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 SYNGR2O43760 224 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 KIR2DS4P43632 304 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 NUBP1P53384 320 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 RAB4BP61018 213 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 KIR2DS1Q14954 304 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 TESK1Q15569 626 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 TMEM41BQ5BJD5 291 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 COA6Q5JTJ3 125 aaKnown RBP20.25■□□□□ 0.83
SHD-201ENST00000543264 CYP2G1PQ6ZSU1 146 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 HAPLN4Q86UW8 402 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 OR2H1Q9GZK4 316 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 FUT9Q9Y231 359 aa20.25■□□□□ 0.83
SHD-201ENST00000543264 MMP7P09237 267 aaPredicted RBP20.24■□□□□ 0.83
SHD-201ENST00000543264 OR4A8P0C604 315 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 EDN3P14138 238 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 CLDN15P56746 228 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 RPL23P62829 140 aaKnown RBP20.24■□□□□ 0.83
SHD-201ENST00000543264 SERF2P84101 59 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 LRRC75BQ2VPJ9 315 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 ATP23Q9Y6H3 246 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 LRRC3CA6NJW4 275 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 S100GP29377 79 aa20.24■□□□□ 0.83
SHD-201ENST00000543264 RNPS1Q15287 305 aaKnown RBP20.24■□□□□ 0.83
SHD-201ENST00000543264 LIFP15018 202 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 EN2P19622 333 aaPredicted RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 G0S2P27469 103 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 DSCR4P56555 118 aaPredicted RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 MEF2BQ02080 365 aaPredicted RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 MRPL41Q8IXM3 137 aaKnown RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 OR4C12Q96R67 309 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 C19orf25Q9UFG5 118 aaPredicted RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 PRSS8Q16651 343 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 TGIF2LYQ8IUE0 185 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 OR1K1Q8NGR3 316 aa20.23■□□□□ 0.83
SHD-201ENST00000543264 ERRFI1Q9UJM3 462 aaPredicted RBP20.23■□□□□ 0.83
SHD-201ENST00000543264 ADAMTS20P59510 1910 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 CD300LBA8K4G0 201 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 C2CD4DB7Z1M9 353 aa20.22■□□□□ 0.83
SHD-201ENST00000543264 KBTBD11O94819 623 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms