RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RBFOX3A6NFN3 312 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 PCP4L1A6NKN8 68 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 A6NLC8 198 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 NPIPB11E5RHQ5 1161 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 PGLYRP1O75594 196 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 NEURL1O76050 574 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 IGHV3-9P01782 118 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 S100A8P05109 93 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CD3EP07766 207 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SMIM6P0DI80 62 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 HAAOP46952 286 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ASCL1P50553 236 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 GPM6AP51674 278 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CCL20P78556 96 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR8G1Q15617 311 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 EIF2S3LQ2VIR3 472 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF324BQ6AW86 544 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 DPPA3Q6W0C5 159 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 DBX2Q6ZNG2 339 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF565Q8N9K5 539 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR2M7Q8NG81 312 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR2G3Q8NGZ4 309 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MRPL30Q8TCC3 161 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5P3Q8WZ94 311 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 POM121L2Q96KW2 1035 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 FAM173AQ9BQD7 235 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZPBPQ9BS86 351 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CABLES2Q9BTV7 478 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ABHD14AQ9BUJ0 271 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MRPL18Q9H0U6 180 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 PLK3Q9H4B4 646 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 TAAR3PQ9P1P4 343 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 KIAA1456Q9P272 454 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 IL36RNQ9UBH0 155 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 FBXO7Q9Y3I1 522 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 RFNGQ9Y644 331 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A087WWC5 75 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 TRAV24A0A0B4J272 114 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 PIGBOS1A0A0B4J2F0 54 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1B0GU03 582 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 C5orf49A4QMS7 147 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5B21A6NL26 309 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 TRAPPC2LH3BP13 241 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 M0R036 132 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 HSD17B6O14756 317 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 HSPA12AO43301 675 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SYNGR1O43759 233 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CHST1O43916 411 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SSSCA1O60232 199 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 NGFP01138 241 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 HLA-HP01893 362 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 DAOP14920 347 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 F2RP25116 425 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ARR3P36575 388 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 DYNLT3P51808 116 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 FOXG1P55316 489 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 RPS23P62266 143 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 IL24Q13007 206 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 TSC22D1Q15714 1073 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SOHLH1Q5JUK2 328 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SPIN3Q5JUX0 258 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF506Q5JVG8 444 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SPINK14Q6IE38 97 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 CDPF1Q6NVV7 123 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 IGF2-ASQ6U949 168 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MRPL21Q7Z2W9 205 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 H1FOOQ8IZA3 346 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 BATF2Q8N1L9 274 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 SUMF2Q8NBJ7 301 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR10G4Q8NGN3 311 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 OR5C1Q8NGR4 320 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ISOC2Q96AB3 205 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MUCL1Q96DR8 90 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ATP5SQ99766 215 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 RARRES2Q99969 163 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 DDA1Q9BW61 102 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 PKIBQ9C010 78 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MAGT1Q9H0U3 335 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF552Q9H707 407 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 LRFN1Q9P244 771 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 LOXL2Q9Y4K0 774 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 MPC1Q9Y5U8 109 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 FRYLO94915 3013 aa4.42□□□□□ -1.7
ATPAF1-212ENST00000542495 WDR87Q6ZQQ6 2873 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 hCG_1809904A0A1W2PP81 198 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1W2PPE2 198 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1W2PR64 198 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 A0A1W2PRV1 198 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 CD300LBA8K4G0 201 aa4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.41□□□□□ -1.7
ATPAF1-212ENST00000542495 TXNL1O43396 289 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms