RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 RPS4XP62701 263 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 CBLN2Q8IUK8 224 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 OR10AG1Q8NH19 301 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RND1Q92730 232 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 LINC00470Q9BZP3 86 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 IBA57Q5T440 356 aaKnown RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 NUBPLQ8TB37 319 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 PTP4A1Q93096 173 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 C10orf35Q96D05 121 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 ZNF770Q6IQ21 691 aaPredicted RBP13.53□□□□□ -0.24
HMGA2-210ENST00000541363 GPR82Q96P67 336 aa13.53□□□□□ -0.24
HMGA2-210ENST00000541363 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.24
HMGA2-210ENST00000541363 A0A1W2PQM1 296 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 CGB1A6NKQ9 187 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 LEUTXA8MZ59 168 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 SLC25A20O43772 301 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 NAT2P11245 290 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 PSG6Q00889 435 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 GAPTQ8N292 157 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 TEX29Q8N6K0 151 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 GVQW1Q8N7I0 195 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.24
HMGA2-210ENST00000541363 GFERP55789 205 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 FMODQ06828 376 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 PHLDA1Q8WV24 401 aaPredicted RBP13.52□□□□□ -0.24
HMGA2-210ENST00000541363 KIR2DL4Q99706 377 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 SOSTQ9BQB4 213 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 ADAMTS5Q9UNA0 930 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 NEU3Q9UQ49 428 aa13.52□□□□□ -0.24
HMGA2-210ENST00000541363 PRR7Q8TB68 274 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 PARP11Q9NR21 331 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 HLA-DRB1P01911 266 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 EWSR1Q01844 656 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGA2-210ENST00000541363 SMAD4Q13485 552 aaKnown RBP13.52□□□□□ -0.25
HMGA2-210ENST00000541363 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGA2-210ENST00000541363 MRGPRFQ96AM1 343 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 DDX60Q8IY21 1712 aaKnown RBP13.52□□□□□ -0.25
HMGA2-210ENST00000541363 IGHV3-21A0A0B4J1V1 117 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 CLPPQ16740 277 aaPredicted RBP13.52□□□□□ -0.25
HMGA2-210ENST00000541363 WDFY2Q96P53 400 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 SCNM1Q9BWG6 230 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
HMGA2-210ENST00000541363 ZNF56Q15929 161 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 PGLYRP4Q96LB8 373 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 MMP25Q9NPA2 562 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 PSG9Q00887 426 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 MMDQ15546 238 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 MOGAT3Q86VF5 341 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 RCC2Q9P258 522 aaKnown RBP13.51□□□□□ -0.25
HMGA2-210ENST00000541363 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 SNRNP200O75643 2136 aaKnown RBP13.51□□□□□ -0.25
HMGA2-210ENST00000541363 ANOS1P23352 680 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 AURKAIP1Q9NWT8 199 aaPredicted RBP13.51□□□□□ -0.25
HMGA2-210ENST00000541363 GABRG2P18507 467 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 CX3CL1P78423 397 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 FZD5Q13467 585 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 SELENOPP49908 381 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 ZNF117Q03924 483 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 EIF3IQ13347 325 aaKnown RBP13.51□□□□□ -0.25
HMGA2-210ENST00000541363 C12orf73Q69YU5 71 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 SRFP11831 508 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 RNF122Q9H9V4 155 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 IL20Q9NYY1 176 aa13.51□□□□□ -0.25
HMGA2-210ENST00000541363 A0A0B4J2E0 115 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 A0A1B0GX12 115 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 HKR1P10072 659 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 CRYBB2P43320 205 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 FAM109BQ6ICB4 259 aaPredicted RBP13.5□□□□□ -0.25
HMGA2-210ENST00000541363 TCF24Q7RTU0 167 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 FFAR1O14842 300 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 FGF9P31371 208 aaPredicted RBP13.5□□□□□ -0.25
HMGA2-210ENST00000541363 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 CEACAM18A8MTB9 384 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 MPLP40238 635 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 NXPH1P58417 271 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 OR52M1Q8NGK5 317 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 PLPP3O14495 311 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 MOSPD3O75425 235 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 FAM106CPP0CH98 169 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 CDKN2AP42771 156 aaKnown RBP13.5□□□□□ -0.25
HMGA2-210ENST00000541363 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 TSPOP30536 169 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 OR8B12Q8NGG6 310 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 NPFFR1Q9GZQ6 430 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 SIGLEC7Q9Y286 467 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 TMEM210A6NLX4 147 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 KLKB1P03952 638 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 GLULP15104 373 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 CCL4L1Q8NHW4 92 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 SYT11Q9BT88 431 aa13.5□□□□□ -0.25
HMGA2-210ENST00000541363 CLN8Q9UBY8 286 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms