RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ZNF429Q86V71 674 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 HAS2Q92819 552 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 METTL9Q9H1A3 318 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 ANXA10Q9UJ72 324 aa12.31□□□□□ -0.44
SFSWAP-210ENST00000541286 A0A0J9YW62 118 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 NPIPB13A6NJU9 1138 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 NPIPB4C9JG80 1138 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 PAX6P26367 422 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 HMGN3Q15651 99 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 BATFQ16520 125 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 SRXN1Q9BYN0 137 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 MAGT1Q9H0U3 335 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 FBXW12Q6X9E4 464 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 RPRMLQ8N4K4 120 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 NEU1Q99519 415 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 ABI3Q9P2A4 366 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 CADP27708 2225 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 FIGNL2A6NMB9 653 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF724A8MTY0 619 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 DANCRP0C864 163 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 B3GALT5-AS1P59052 145 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 RND3P61587 244 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 GALNT14Q96FL9 552 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 FBLN5Q9UBX5 448 aa12.3□□□□□ -0.44
SFSWAP-210ENST00000541286 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 KIAA2026Q5HYC2 2103 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 IFNA10P01566 189 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 MBPP02686 304 aaPredicted RBP12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 CD46P15529 392 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 RUNX1Q01196 453 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 MBP02144 154 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 DUSP1P28562 367 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 MRPL37Q9BZE1 423 aaKnown RBP12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 ST3GAL6Q9Y274 331 aa12.29□□□□□ -0.44
SFSWAP-210ENST00000541286 A0A1W2PR80 420 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CXCL13O43927 109 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CBR3O75828 277 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CCL2P13500 99 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CD33P20138 364 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 FUT3P21217 361 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 OR2G3Q8NGZ4 309 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM173AQ9BQD7 235 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 PBDC1Q9BVG4 233 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 EDN3P14138 238 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 ZNF32P17041 273 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 NTF4P34130 210 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 PLCXD3Q63HM9 321 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 ESPL1Q14674 2120 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM24AA6NFZ4 105 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 DEDDO75618 318 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CST7O76096 145 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 HERV-K104P61576 105 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 PRSS8Q16651 343 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 CRIP3Q6Q6R5 217 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 ABHD3Q8WU67 409 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 FAM210BQ96KR6 192 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 BCO1Q9HAY6 547 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 SIRT7Q9NRC8 400 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 SLC7A11Q9UPY5 501 aa12.28□□□□□ -0.44
SFSWAP-210ENST00000541286 IGKV1-27A0A075B6S5 117 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 TAAR5O14804 337 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 CD55P08174 381 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 PMELP40967 661 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 TNFRSF9Q07011 255 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 GCNT2Q8N0V5 402 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 Q8NA96 180 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 MALSU1Q96EH3 234 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 NECAP2Q9NVZ3 263 aa12.27□□□□□ -0.44
SFSWAP-210ENST00000541286 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 NRASP01111 189 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 PRB1P04280 392 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 OR4A8P0C604 315 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 GZMBP10144 247 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 DSCR4P56555 118 aaPredicted RBP12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 RAB11AP62491 216 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.45
SFSWAP-210ENST00000541286 ZFP92A6NM28 416 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 A8MWP6 167 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 CEACAM4O75871 244 aa12.26□□□□□ -0.45
SFSWAP-210ENST00000541286 FAM3AP98173 230 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms