RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 IL11RAQ14626 422 aa13.08□□□□□ -0.32
SMARCA4-207ENST00000541122 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 OR2D3Q8NGH3 330 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 C1QL1O75973 258 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 GZMHP20718 246 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 EFNB1P98172 346 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 PIGYQ3MUY2 71 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 C5orf17Q8NAS9 161 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 SSMEM1Q8WWF3 244 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 PCOLCE2Q9UKZ9 415 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 PPP1CAP62136 330 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FUT5Q11128 374 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 HIKESHIQ53FT3 197 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 LRRC29Q8WV35 223 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 THSD7AQ9UPZ6 1657 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
SMARCA4-207ENST00000541122 FAM90A26D6RGX4 464 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 ERGP11308 486 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 MRPS11P82912 194 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 NFAM1Q8NET5 270 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 WNT2BQ93097 391 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 OR2H1Q9GZK4 316 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 ZNF665Q9H7R5 613 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 IGHV1OR21-1A0A087WYE8 117 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 CENPVL1A0A0U1RR11 272 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 ORM1P02763 201 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 NPY1RP25929 384 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 C5orf52A6NGY3 159 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 MELTFP08582 738 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 IGHV3-43DP0DP04 118 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 CD1BP29016 333 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 GNG10P50151 68 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 TGIF2LXQ8IUE1 241 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 CA2P00918 260 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 HINT1P49773 126 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 ZNF506Q5JVG8 444 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 CADM4Q8NFZ8 388 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
SMARCA4-207ENST00000541122 ARID1AO14497 2285 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 ACTL6AO96019 429 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 PPP1CCP36873 323 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 C10orf113Q5VZT2 155 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 TRGV5A0A0B4J1U4 118 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 ORM2P19652 201 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 C5orf66Q9H5L9 145 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 CBLN4Q9NTU7 201 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 THYN1Q9P016 225 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 KCNMB2Q9Y691 235 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 PRRG2O14669 202 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 SRFP11831 508 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 FABP2P12104 132 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 RHBDD2Q6NTF9 364 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 LRRC75AQ8NAA5 344 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 HDHD3Q9BSH5 251 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 RALYQ9UKM9 306 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 POU2F2P09086 479 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 MTURNQ8N3F0 131 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 TAF15Q92804 592 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 PLPPR2Q96GM1 343 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 SARGQ9BW04 601 aa13.05□□□□□ -0.32
SMARCA4-207ENST00000541122 G6PCP35575 357 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 MPLP40238 635 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 CCL7P80098 99 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 SLC25A33Q9BSK2 321 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 MRPL18Q9H0U6 180 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 A0A087WWC5 75 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 PSMB2P49721 201 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 MFAP2P55001 183 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 RSG1Q9BU20 258 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 NPVFQ9HCQ7 196 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 A8MWL6 223 aa13.04□□□□□ -0.32
SMARCA4-207ENST00000541122 SPRY3O43610 288 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms