RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 IGKV1D-39P04432 117 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ERVS71-1P61550 626 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZXDAP98168 799 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ID3Q02535 119 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 C3AR1Q16581 482 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 SPINK9Q5DT21 86 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ZNF787Q6DD87 383 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ASCL4Q6XD76 172 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 TMPRSS7Q7RTY8 843 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 C19orf25Q9UFG5 118 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 LOC102723971A0A1B0GUV8 181 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 RHBDL1O75783 438 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 TFF1P04155 84 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 NDUFB7P17568 137 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 OTX2P32243 289 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 RAC1P63000 192 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 TESK1Q15569 626 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 HLA-CQ95604 372 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 RPUSD4Q96CM3 377 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 POM121Q96HA1 1249 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 SGCZQ96LD1 299 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 ATP5SQ99766 215 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 RBKSQ9H477 322 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 GPR35Q9HC97 309 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 LRFN1Q9P244 771 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 GAB2Q9UQC2 676 aa8.84□□□□□ -0.99
CDC42SE1-207ENST00000540998 PATE3B3GLJ2 98 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 MAS1LP35410 378 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 APLNRP35414 380 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 UCP3P55916 312 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 LINC00205P59089 165 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 P2RY6Q15077 328 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 ADIRFQ15847 76 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 TMEM211Q6ICI0 200 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 KDF1Q8NAX2 398 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-207ENST00000540998 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
CDC42SE1-207ENST00000540998 IMMP1LQ96LU5 166 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 HES7Q9BYE0 225 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 SLC25A31Q9H0C2 315 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 PRDM6Q9NQX0 595 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 DMXL2Q8TDJ6 3036 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 OR5H1A6NKK0 313 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 PHOX2AO14813 284 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 VAMP5O95183 116 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 IGKV1-33P01594 117 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 HSPB1P04792 205 aaKnown RBP8.83□□□□□ -1
CDC42SE1-207ENST00000540998 CST2P09228 141 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 EGR1P18146 543 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 VDAC1P21796 283 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 TAS2R30P59541 319 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 CLN3Q13286 438 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 SPANXN5Q5MJ07 72 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 SP5Q6BEB4 398 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-207ENST00000540998 PACRGQ96M98 296 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-207ENST00000540998 A0A1B0GUS0 222 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 UBE2L5PA0A1B0GUS4 154 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 NR2C1P13056 603 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 Q0VFX4 171 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 OR8B8Q15620 311 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 PCSK4Q6UW60 755 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 CARFQ8N187 725 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 C10orf35Q96D05 121 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 HIST1H2BLQ99880 126 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 GFOD1Q9NXC2 390 aa8.83□□□□□ -1
CDC42SE1-207ENST00000540998 WDR1O75083 606 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 NAPSAO96009 420 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
CDC42SE1-207ENST00000540998 UCP1P25874 307 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 RAC3P60763 192 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 ARF1P84077 181 aaKnown RBP8.82□□□□□ -1
CDC42SE1-207ENST00000540998 CABLES2Q9BTV7 478 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 SLC25A22Q9H936 323 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 OR14J1Q9UGF5 321 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 KCNS2Q9ULS6 477 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 A0A1B0GW64 132 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 SERPINE2P07093 398 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 MMP7P09237 267 aaPredicted RBP8.82□□□□□ -1
CDC42SE1-207ENST00000540998 GZMHP20718 246 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 TLE4Q04727 773 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 EIF3IQ13347 325 aaKnown RBP8.82□□□□□ -1
CDC42SE1-207ENST00000540998 SPINK14Q6IE38 97 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 STX12Q86Y82 276 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 CA5BP1Q8WTZ4 195 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 RNF150Q9ULK6 438 aa8.82□□□□□ -1
CDC42SE1-207ENST00000540998 SOX15O60248 233 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 IGKV1-5P01602 117 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 BCL2P10415 239 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 F2RP25116 425 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 GDF1P27539 372 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 EPHA8P29322 1005 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-207ENST00000540998 IL2RGP31785 369 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 CEBPDP49716 269 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-207ENST00000540998 SPIN2AQ99865 258 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 SPIN2BQ9BPZ2 258 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 RBM7Q9Y580 266 aaKnown RBP8.81□□□□□ -1
CDC42SE1-207ENST00000540998 A0A087X0M5 115 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 A0A1B0GU03 582 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 A0A1B0GX30 115 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms