RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 LYPD6Q86Y78 171 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 Q8N6K4 173 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF439Q8NDP4 499 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 RTN4IP1Q8WWV3 396 aaPredicted RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 PAK1IP1Q9NWT1 392 aaPredicted RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 CHCHD3Q9NX63 227 aaKnown RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 ETAA1Q9NY74 926 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 RCC2Q9P258 522 aaKnown RBP11.41□□□□□ -0.58
MSRB3-209ENST00000540804 TRAPPC2LQ9UL33 140 aa11.41□□□□□ -0.58
MSRB3-209ENST00000540804 UBE2QL1A1L167 161 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 ORC5O43913 435 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 ZNF780AO75290 641 aaPredicted RBP11.4□□□□□ -0.58
MSRB3-209ENST00000540804 HBZP02008 142 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 RCC1P18754 421 aaPredicted RBP11.4□□□□□ -0.58
MSRB3-209ENST00000540804 FSTP19883 344 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 THBS3P49746 956 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 RCN1Q15293 331 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 CT45A1Q5HYN5 189 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 AWAT2Q6E213 333 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 SIGIRRQ6IA17 410 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 AHSA2Q719I0 299 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 STPG2Q8N412 459 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 Q8N9W7 124 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 CT45A3Q8NHU0 189 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 CHPT1Q8WUD6 406 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.58
MSRB3-209ENST00000540804 DERL3Q96Q80 235 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 SELENOIQ9C0D9 397 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 PLSCR3Q9NRY6 295 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 CKLFQ9UBR5 152 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
MSRB3-209ENST00000540804 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.59
MSRB3-209ENST00000540804 NUDT19A8MXV4 375 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 MCRIP1C9JLW8 97 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 CRTAPO75718 401 aaPredicted RBP11.39□□□□□ -0.59
MSRB3-209ENST00000540804 MGMTP16455 207 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 CELP19835 753 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 GPR12P47775 334 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 F2RL1P55085 397 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 GP2P55259 537 aaKnown RBP11.39□□□□□ -0.59
MSRB3-209ENST00000540804 GNMTQ14749 295 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 DEFB121Q5J5C9 76 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 IZUMO1Q8IYV9 350 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 SETD9Q8NE22 299 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 KLHL30-AS1Q8NEE0 82 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 BPIFB6Q8NFQ5 453 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
MSRB3-209ENST00000540804 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
MSRB3-209ENST00000540804 CAPGP40121 348 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 MED21Q13503 144 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 GPR176Q14439 515 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 DEFB136Q30KP8 78 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 FAM27D1Q5T7N8 215 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 OR10K2Q6IF99 312 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 C11orf87Q6NUJ2 197 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
MSRB3-209ENST00000540804 TGIF2LXQ8IUE1 241 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 STX19Q8N4C7 294 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 PACRGLQ8N7B6 248 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 OR52L2PQ8NGH6 319 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 OR2T10Q8NGZ9 312 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 ABCG5Q9H222 651 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 KCNK15Q9H427 330 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 GNG12Q9UBI6 72 aa11.38□□□□□ -0.59
MSRB3-209ENST00000540804 EFCAB10A6NFE3 127 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 SPINT2O43291 252 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 MOSP00540 346 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 WNT4P56705 351 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 FOXRED2Q8IWF2 684 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 C8orf59Q8N0T1 100 aaPredicted RBP11.37□□□□□ -0.59
MSRB3-209ENST00000540804 GAPTQ8N292 157 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 NANOGP1Q8N7R0 232 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 C8orf31Q8N9H6 132 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 FBLIM1Q8WUP2 373 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 TFAP2CQ92754 450 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 RITA1Q96K30 269 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 Q96M66 194 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 S1PR3Q99500 378 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
MSRB3-209ENST00000540804 CNOT2Q9NZN8 540 aaKnown RBP11.37□□□□□ -0.59
MSRB3-209ENST00000540804 MYL12BO14950 172 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 SC5DO75845 299 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 IL3RAP26951 378 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 CD1BP29016 333 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 RAB25P57735 213 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 SLC35B1P78383 322 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 NKAPLQ5M9Q1 402 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 OGFRL1Q5TC84 451 aaPredicted RBP11.36□□□□□ -0.59
MSRB3-209ENST00000540804 ZNF695Q8IW36 515 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
MSRB3-209ENST00000540804 MRPL30Q8TCC3 161 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms