RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 CA11O75493 328 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 CRTAPO75718 401 aaPredicted RBP16.64■□□□□ 0.25
CHFR-217ENST00000540537 IGKV1D-33P01593 117 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 IGKV1-33P01594 117 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 GLAP06280 429 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 IL3RAP26951 378 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 EBI3Q14213 229 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 C6orf183Q5T699 404 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 SYT6Q5T7P8 510 aaPredicted RBP16.64■□□□□ 0.25
CHFR-217ENST00000540537 MS4A15Q8N5U1 240 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 TMEM104Q8NE00 496 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 UBALD1Q8TB05 177 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 TRAPPC2LQ9UL33 140 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 PEX16Q9Y5Y5 336 aa16.64■□□□□ 0.25
CHFR-217ENST00000540537 IGHV3-43A0A0B4J1X8 118 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 C12orf77C9JDV5 145 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 SPINT2O43291 252 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 SC5DO75845 299 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 IGHV3-43DP0DP04 118 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 PF4V1P10720 104 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 FUT3P21217 361 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 OXLD1Q5BKU9 147 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 C6orf141Q5SZD1 244 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 TRAT1Q6PIZ9 186 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 C10orf99Q6UWK7 81 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 UNQ9370/PRO34162Q6UXP9 181 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 MOB3BQ86TA1 216 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 IZUMO1Q8IYV9 350 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 WFDC9Q8NEX5 89 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 OR4K15Q8NH41 348 aa16.63■□□□□ 0.25
CHFR-217ENST00000540537 REG1BP48304 166 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 GABPB1Q06547 395 aaPredicted RBP16.62■□□□□ 0.25
CHFR-217ENST00000540537 GPR50Q13585 617 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 HNF4GQ14541 408 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 ACSM3Q53FZ2 586 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 FAM53AQ6NSI3 398 aaPredicted RBP16.62■□□□□ 0.25
CHFR-217ENST00000540537 REC114Q7Z4M0 266 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 ST6GALNAC6Q969X2 333 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 CST11Q9H112 138 aa16.62■□□□□ 0.25
CHFR-217ENST00000540537 NKX1-2Q9UD57 310 aaPredicted RBP16.62■□□□□ 0.25
CHFR-217ENST00000540537 LSM2Q9Y333 95 aaKnown RBP16.62■□□□□ 0.25
CHFR-217ENST00000540537 PSMB11A5LHX3 300 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 PTGES3LE9PB15 166 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 PDCD6O75340 191 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 HBZP02008 142 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 UBBP0CG47 229 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 GP2P55259 537 aaKnown RBP16.61■□□□□ 0.25
CHFR-217ENST00000540537 INSL4Q14641 139 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 SLC25A48Q6ZT89 311 aaKnown RBP16.61■□□□□ 0.25
CHFR-217ENST00000540537 Q8N6K4 173 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 CHPT1Q8WUD6 406 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 RTN4IP1Q8WWV3 396 aaPredicted RBP16.61■□□□□ 0.25
CHFR-217ENST00000540537 PHYHIPQ92561 330 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 SCN3BQ9NY72 215 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 GNG12Q9UBI6 72 aa16.61■□□□□ 0.25
CHFR-217ENST00000540537 H0YHG0 523 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 CD33P20138 364 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 CD1BP29016 333 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 ZNF137PP52743 207 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 SPHARQ15513 63 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 KHDC1LQ5JSQ8 128 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 GLT8D1Q68CQ7 371 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 ZNF554Q86TJ5 538 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 LRRTM1Q86UE6 522 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 ZNF439Q8NDP4 499 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 OR2T10Q8NGZ9 312 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 OR1L1Q8NH94 360 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 FAM46BQ96A09 425 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 EAF1Q96JC9 268 aaPredicted RBP16.6■□□□□ 0.25
CHFR-217ENST00000540537 TMED9Q9BVK6 235 aa16.6■□□□□ 0.25
CHFR-217ENST00000540537 MBNL3Q9NUK0 354 aaKnown RBP16.6■□□□□ 0.25
CHFR-217ENST00000540537 IGHV3-72A0A0B4J1Y9 119 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 UBE2QL1A1L167 161 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 SLC31A2O15432 143 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 TXNL1O43396 289 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 MPIG6BO95866 241 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 IGHG2P01859 326 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 PF4P02776 101 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 RCC1P18754 421 aaPredicted RBP16.59■□□□□ 0.25
CHFR-217ENST00000540537 VHLP40337 213 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 C1orf100Q5SVJ3 147 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 FAM27D1Q5T7N8 215 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 STEAP3Q658P3 488 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 TGIF2LXQ8IUE1 241 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 PHF21AQ96BD5 680 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 NECAP2Q9NVZ3 263 aa16.59■□□□□ 0.25
CHFR-217ENST00000540537 SERPINE3A8MV23 424 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 PRB2P02812 416 aaPredicted RBP16.58■□□□□ 0.24
CHFR-217ENST00000540537 ZNF134P52741 427 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 AQP4P55087 323 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 SLC35A2P78381 396 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 IRF3Q14653 427 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 CT45A1Q5HYN5 189 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 RBM48Q5RL73 367 aaKnown RBP16.58■□□□□ 0.24
CHFR-217ENST00000540537 SLC35E3Q7Z769 313 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 OR10V1Q8NGI7 309 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 CT45A3Q8NHU0 189 aa16.58■□□□□ 0.24
CHFR-217ENST00000540537 NRG4Q8WWG1 115 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms