RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 DEGS1O15121 323 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 PITX3O75364 302 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 UCP1P25874 307 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CD1BP29016 333 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 UBE2G1P62253 170 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 FZD5Q13467 585 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 KCNMB1Q16558 191 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 AADACL3Q5VUY0 350 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 Q6ZS52 159 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 RBMXL3Q8N7X1 1067 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SMIM8Q96KF7 97 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CISD1Q9NZ45 108 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 LAMTOR2Q9Y2Q5 125 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TRBV24-1A0A075B6N3 115 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 IGHV1OR21-1A0A087WYE8 117 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 LINC01549A6NIU2 74 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CA2P00918 260 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 OR4A8P0C604 315 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 BCL2P10415 239 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 FSTP19883 344 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 FUT3P21217 361 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 IER3P46695 156 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 C1orf61Q13536 156 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF506Q5JVG8 444 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 OTPQ5XKR4 325 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 C16orf52Q8NHV5 167 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CPT1CQ8TCG5 803 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 PATE1Q8WXA2 126 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM147Q9BVK8 224 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 FAM60AQ9NP50 221 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SLCO1C1Q9NYB5 712 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 B3GAT1Q9P2W7 334 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF346Q9UL40 294 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 HCRTR1O43613 425 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CT62P0C5K7 136 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 CD46P15529 392 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H1CP16403 213 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 VDAC1P21796 283 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 HTR1DP28221 377 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 RPS4XP62701 263 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 NR0B2Q15466 257 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 IGFBP7Q16270 282 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 LTC4SQ16873 150 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SMIM21Q3B7S5 101 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM52Q8NDY8 209 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 OR5C1Q8NGR4 320 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 ST6GALNAC6Q969X2 333 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SLC25A28Q96A46 364 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 SLAMF6Q96DU3 332 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 RSPO3Q9BXY4 272 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
PTPRD-214ENST00000540109 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 MYO7AQ13402 2215 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 FANCMQ8IYD8 2048 aa5.31□□□□□ -1.56
PTPRD-214ENST00000540109 J3KRW8 73 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 THY1P04216 161 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 OR1D4P47884 311 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 LSM6P62312 80 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 PMVKQ15126 192 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 NUFIP2Q7Z417 695 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 RNASEH2CQ8TDP1 164 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF160Q9HCG1 818 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 TBL2Q9Y4P3 447 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 NUP214P35658 2090 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 NPIPB13A6NJU9 1138 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 NPIPB4C9JG80 1138 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HSPB6O14558 160 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 IRF2P14316 349 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 RPS27P42677 84 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 GNG4P50150 75 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ARIH2OSQ8N7S6 290 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ST8SIA1Q92185 356 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 SPACA5Q96QH8 159 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 TAAR6Q96RI8 345 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 WFDC6Q9BQY6 131 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HEXA-AS1Q9H8Q6 139 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 TIMM9Q9Y5J7 89 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ALG1L2C9J202 215 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 RAB9AP51151 201 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 UBE2NP61088 152 aaKnown RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 PTCRAQ6ISU1 281 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 C19orf24Q9BVV8 132 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 NAA60Q9H7X0 242 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 FLRT3Q9NZU0 649 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ARID1BQ8NFD5 2236 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 CTAG2O75638 210 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 CA1P00915 261 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ZGLP1P0C6A0 271 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 FCGR2AP12318 317 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ZBTB25P24278 435 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 COL10A1Q03692 680 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 FNDC7Q5VTL7 733 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 LHFPL2Q6ZUX7 228 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 PRSS41Q7RTY9 318 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ATG4DQ86TL0 474 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 PLSCR4Q9NRQ2 329 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 MDC1Q14676 2089 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms