RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 SPTY2D1-AS1A0A0U1RR47 76 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 SLC25A17O43808 307 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 SLC35E3Q7Z769 313 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
CACNB4-210ENST00000539935 GABRA1P14867 456 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
CACNB4-210ENST00000539935 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 P2RY1P47900 373 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 CLPPQ16740 277 aaPredicted RBP11.32□□□□□ -0.6
CACNB4-210ENST00000539935 ASCL5Q7RTU5 278 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 OR4D9Q8NGE8 314 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 WNT5BQ9H1J7 359 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 TNFRSF12AQ9NP84 129 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
CACNB4-210ENST00000539935 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 ARG1P05089 322 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 STXBP6Q8NFX7 210 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 NKX2-2O95096 273 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 FOXC1Q12948 553 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
CACNB4-210ENST00000539935 MPC1Q9Y5U8 109 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 BCORQ6W2J9 1755 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 SLC25A20O43772 301 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 DDB2Q92466 427 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 STARD10Q9Y365 291 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 MOSPD3O75425 235 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 CDS2O95674 445 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 CKS2P33552 79 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 A0A1W2PRD5 423 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 A0A1W2PRF3 423 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 A0A1W2PRM7 423 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 CDX4O14627 284 aaPredicted RBP11.31□□□□□ -0.6
CACNB4-210ENST00000539935 RBKSQ9H477 322 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 TMEM249Q2WGJ8 235 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 NSUN5P2Q63ZY6 315 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 OR8B3Q8NGG8 313 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 OR8B2Q96RD0 313 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 POLR2GP62487 172 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNB4-210ENST00000539935 AWAT1Q58HT5 328 aa11.31□□□□□ -0.6
CACNB4-210ENST00000539935 MEX3AA1L020 520 aaKnown RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 SKP2Q13309 424 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 ZNF770Q6IQ21 691 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 Q6ZNB5 142 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 MRPS11P82912 194 aaKnown RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 FZD5Q13467 585 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 RTN4RQ9BZR6 473 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 FANCMQ8IYD8 2048 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 PLPP3O14495 311 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 CXorf1O96002 111 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 SMIM6P0DI80 62 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 DLX6P56179 175 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 ACER2Q5QJU3 275 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 FXYD1O00168 92 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 RTN4RL1Q86UN2 441 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 WDFY1Q8IWB7 410 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 C10orf113Q5VZT2 155 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 C10orf35Q96D05 121 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 ZFP64Q9NPA5 681 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
CACNB4-210ENST00000539935 ABCA3Q99758 1704 aa11.3□□□□□ -0.6
CACNB4-210ENST00000539935 METTL12A8MUP2 240 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 APELAP0DMC3 54 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 LRRC3BQ96PB8 259 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 GLRX2Q9NS18 164 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 HSF4Q9ULV5 492 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 KBTBD11O94819 623 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
CACNB4-210ENST00000539935 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
CACNB4-210ENST00000539935 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
CACNB4-210ENST00000539935 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 DOCK1Q14185 1865 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 CXorf51AA0A1B0GTR3 108 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 CD3EP07766 207 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 VDAC1P21796 283 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 DLK1P80370 383 aa11.29□□□□□ -0.6
CACNB4-210ENST00000539935 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms