RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 S100A9P06702 114 aaKnown RBP12.78□□□□□ -0.36
DDB1-216ENST00000539739 TMEM50BP56557 158 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 LCN2P80188 198 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 MOGAT2Q3SYC2 334 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 BTN2A1Q7KYR7 527 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 BIVMQ86UB2 503 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 FGFRL1Q8N441 504 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 LINC01356Q8N9X3 169 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 C1orf159Q96HA4 380 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 PECRQ9BY49 303 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 OR51M1Q9H341 326 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 DOCK11Q5JSL3 2073 aa12.78□□□□□ -0.36
DDB1-216ENST00000539739 AKAP9Q99996 3911 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 CA11O75493 328 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 FCN3O75636 299 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 EIF4EP06730 217 aaKnown RBP12.77□□□□□ -0.36
DDB1-216ENST00000539739 CDK2P24941 298 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.36
DDB1-216ENST00000539739 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.36
DDB1-216ENST00000539739 AESQ08117 197 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 PYHIN1Q6K0P9 492 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 CIARTQ8N365 385 aaPredicted RBP12.77□□□□□ -0.36
DDB1-216ENST00000539739 SULT4A1Q9BR01 284 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 DCTN5Q9BTE1 182 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 LPAR2Q9HBW0 351 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.36
DDB1-216ENST00000539739 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.36
DDB1-216ENST00000539739 A8MV72 311 aaPredicted RBP12.77□□□□□ -0.37
DDB1-216ENST00000539739 KIAA1324LA8MWY0 1029 aaPredicted RBP12.77□□□□□ -0.37
DDB1-216ENST00000539739 XRCC3O43542 346 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 MSMBP08118 114 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 HIST1H1DP16402 221 aaKnown RBP12.77□□□□□ -0.37
DDB1-216ENST00000539739 ELK1P19419 428 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 AKR1D1P51857 326 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 CDNFQ49AH0 187 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 PLAC9Q5JTB6 97 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.37
DDB1-216ENST00000539739 SDHCQ99643 169 aaPredicted RBP12.77□□□□□ -0.37
DDB1-216ENST00000539739 RPUSD1Q9UJJ7 312 aaKnown RBP12.77□□□□□ -0.37
DDB1-216ENST00000539739 TEX15Q9BXT5 2789 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 A0A1W2PQ09 198 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 TMEM30CPA0ZSE6 113 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 SERPINE3A8MV23 424 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 ENSAO43768 121 aaKnown RBP12.76□□□□□ -0.37
DDB1-216ENST00000539739 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 GNB3P16520 340 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 MNDAP41218 407 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 PAX5Q02548 391 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 MEF2CQ06413 473 aaPredicted RBP12.76□□□□□ -0.37
DDB1-216ENST00000539739 SLC35E4Q6ICL7 350 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 LAX1Q8IWV1 398 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 FAM185AQ8N0U4 392 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 C18orf12Q96KH6 178 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
DDB1-216ENST00000539739 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 PPIAL4CA0A0B4J2A2 164 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 A0A1W2PPH5 198 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 C22orf46C9J442 243 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 LIPFP07098 398 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 GSTP1P09211 210 aaKnown RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 RPL35P42766 123 aaKnown RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 GLIPR1P48060 266 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 BPIFB3P59826 476 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 RRAS2P62070 204 aaPredicted RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 FGL1Q08830 312 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 BTNL3Q6UXE8 466 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 ZNF497Q6ZNH5 498 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 MSI2Q96DH6 328 aaKnown RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 COQ2Q96H96 371 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 CMSS1Q9BQ75 279 aaKnown RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 MIXL1Q9H2W2 232 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 RIMS4Q9H426 269 aaPredicted RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 ZMAT3Q9HA38 289 aaKnown RBP12.75□□□□□ -0.37
DDB1-216ENST00000539739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDB1-216ENST00000539739 RDH8Q9NYR8 311 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 OR6C3Q9NZP0 311 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
DDB1-216ENST00000539739 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 ODAMA1E959 279 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 MFSD2BA6NFX1 497 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 MFNGO00587 321 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 DHFRP00374 187 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 TGFAP01135 160 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 CD3GP09693 182 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 ARFRP1Q13795 201 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 ZNF260Q3ZCT1 412 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 MZT2BQ6NZ67 158 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms