RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 C15orf65H3BRN8 121 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 HSPA12AO43301 675 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 NPY4RP50391 375 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 RAB25P57735 213 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 ZNF660Q6AZW8 331 aaPredicted RBP13.37□□□□□ -0.27
TRAF3-204ENST00000539721 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 FAM185AQ8N0U4 392 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 RFESDQ8TAC1 157 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 MRGPRFQ96AM1 343 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 CALYQ9NYX4 217 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 OR1A1Q9P1Q5 309 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 CLN8Q9UBY8 286 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
TRAF3-204ENST00000539721 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 OR5H14A6NHG9 310 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-204ENST00000539721 DIRAS3O95661 229 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 DNASE1P24855 282 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 AADACL3Q5VUY0 350 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 WDR25Q64LD2 544 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-204ENST00000539721 TCF23Q7RTU1 214 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 MARCH1Q8TCQ1 289 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 CORO2AQ92828 525 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
TRAF3-204ENST00000539721 UBE2J1Q9Y385 318 aaPredicted RBP13.36□□□□□ -0.27
TRAF3-204ENST00000539721 ZNF729A6NN14 1252 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-204ENST00000539721 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 NDUFS8O00217 210 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 GPR37O15354 613 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 RLN1P04808 185 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 CGB3P0DN86 165 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 CGB7P0DN87 165 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 AADACP22760 399 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 FXYD4P59646 89 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 HERV-K104P61576 105 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 GNB2P62879 340 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 ZNF273Q14593 569 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 LTC4SQ16873 150 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 ZDHHC22Q8N966 263 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 C10orf105Q8TEF2 133 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 ZNF69Q9UC07 566 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 DOCK11Q5JSL3 2073 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 KBTBD11-OT1A0A1B0GTJ5 212 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 FAM172BPA6NC97 362 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 DHFRP00374 187 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 PPYP01298 95 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 PGAM2P15259 253 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 ZBTB25P24278 435 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 FPR2P25090 351 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 C17orf58Q2M2W7 97 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 TMEM200BQ69YZ2 307 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 H1FOOQ8IZA3 346 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-204ENST00000539721 OR52L2PQ8NGH6 319 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 NINJ1Q92982 152 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 TOMM40LQ969M1 308 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 FXYD6Q9H0Q3 95 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 GAL3ST2Q9H3Q3 398 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
TRAF3-204ENST00000539721 TAS2R3Q9NYW6 316 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 VSIG4Q9Y279 399 aa13.35□□□□□ -0.27
TRAF3-204ENST00000539721 FBN2P35556 2912 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 IGHV3-43A0A0B4J1X8 118 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 IGHV3-43DP0DP04 118 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 CEACAM6P40199 344 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 ECI1P42126 302 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 DSCR9P59020 149 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 HTD2P86397 168 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 ESCO2Q56NI9 601 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 TMED4Q7Z7H5 227 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 MOB3AQ96BX8 217 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 ZNF714Q96N38 554 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 SSBP3Q9BWW4 388 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-204ENST00000539721 BEX2Q9BXY8 128 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 BEX1Q9HBH7 125 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 OR2S2Q9NQN1 319 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 SPG11Q96JI7 2443 aa13.34□□□□□ -0.27
TRAF3-204ENST00000539721 ARID1AO14497 2285 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 F2RL2O00254 374 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 PEX14O75381 377 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 TUSC2O75896 110 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 IGHV2-5P01817 119 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 HEXAP06865 529 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 ZNF728P0DKX0 622 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.28
TRAF3-204ENST00000539721 OMGP23515 440 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 RAG2P55895 527 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 BAMBIQ13145 260 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-204ENST00000539721 DEFB113Q30KQ7 82 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 RDH8Q9NYR8 311 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 TACC2O95359 2948 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 YLPM1P49750 1951 aaKnown RBP13.33□□□□□ -0.28
TRAF3-204ENST00000539721 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
TRAF3-204ENST00000539721 PHF1O43189 567 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-204ENST00000539721 CCL3L1P16619 93 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 GNMTQ14749 295 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms