RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ZFP90Q8TF47 636 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 SSC4DQ8WTU2 575 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 UCN3Q969E3 161 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 CLDN23Q96B33 292 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 CNRIP1Q96F85 164 aaPredicted RBP2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 RDH12Q96NR8 316 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 PITX2Q99697 317 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 FAAP24Q9BTP7 215 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 TMED9Q9BVK6 235 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 SPHK2Q9NRA0 654 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 OR1A1Q9P1Q5 309 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 OR52A1Q9UKL2 312 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 UFC1Q9Y3C8 167 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 UBIAD1Q9Y5Z9 338 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 SLC22A7Q9Y694 548 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 TMEM56-RWDD3S4R434 201 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 COL1A2P08123 1366 aa2.97□□□□□ -1.93
AC055720.1-201ENST00000539552 ZBED9Q6R2W3 1325 aa2.96□□□□□ -1.93
AC055720.1-201ENST00000539552 IGKV1D-13A0A0B4J2D9 117 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 TRGV8A0A0C4DH27 118 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 A0A0G2JMP0 313 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 A0A0G2JRQ6 117 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 TEX48A0A1B0GUV7 120 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SYCE1LA8MT33 242 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FOXI3A8MTJ6 420 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FAM72CH0Y354 149 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 KPNA4O00629 521 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 CHP2O43745 196 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 RENP00797 406 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 HCKP08631 526 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 IGKV1-13P0DP09 117 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 IFI30P13284 250 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 ATF1P18846 271 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 HIST1H1TP22492 207 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 MYL9P24844 172 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 PAX6P26367 422 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SPRP35270 261 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 CCL23P55773 120 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 VSX2P58304 361 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 RAB5BP61020 215 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 NAA20P61599 178 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 HIST1H3AP68431 136 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SRPXP78539 464 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 PRR3P79522 188 aaKnown RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 H3F3AP84243 136 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SMAGPQ0VAQ4 97 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 PRSS8Q16651 343 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 MICAQ29983 383 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C17orf58Q2M2W7 97 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 TRMT12Q53H54 448 aaKnown RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 AVPI1Q5T686 147 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FAM72AQ5TYM5 149 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C9orf57Q5W0N0 161 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OTPQ5XKR4 325 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FAM72DQ6L9T8 149 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SPNS3Q6ZMD2 512 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C9orf47Q6ZRZ4 202 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 HIST2H3AQ71DI3 136 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 NOTCH2NLQ7Z3S9 236 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FAM220AQ7Z4H9 259 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C17orf82Q86X59 251 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FAM72BQ86X60 149 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 CATSPER3Q86XQ3 398 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 CDC20BQ86Y33 519 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C6orf223Q8N319 242 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 STX19Q8N4C7 294 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF561Q8N587 486 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 NATD1Q8N6N6 113 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 NPWQ8N729 165 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 COX18Q8N8Q8 333 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR4M2Q8NGB6 313 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR6T1Q8NGN1 323 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR2A12Q8NGT7 310 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR13D1Q8NGV5 346 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR13G1Q8NGZ3 307 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 OR1P1Q8NH06 330 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SLC37A2Q8TED4 501 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 SDR42E1Q8WUS8 393 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C11orf40Q8WZ69 217 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 CPNE2Q96FN4 548 aaPredicted RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 KIR2DL4Q99706 377 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 MED18Q9BUE0 208 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 TAPBPLQ9BX59 468 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 DCSTAMPQ9H295 470 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 FBXL15Q9H469 300 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 RPF2Q9H7B2 306 aaKnown RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 RGS18Q9NS28 235 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 TAS2R5Q9NYW4 299 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 XCL2Q9UBD3 114 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 RWDD2AQ9UIY3 292 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 C14orf166Q9Y224 244 aaKnown RBP2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 ANGPT4Q9Y264 503 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 POLR1DQ9Y2S0 133 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 PRELID3BQ9Y3B1 194 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 NUBP2Q9Y5Y2 271 aa2.96□□□□□ -1.94
AC055720.1-201ENST00000539552 IGHV3OR16-13A0A075B7E8 117 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 IGLV1-36A0A0B4J1U3 117 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms