RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CPNE4Q96A23 557 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 FAM210BQ96KR6 192 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 PRRG4Q9BZD6 226 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 AURKAIP1Q9NWT8 199 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 IGKV1D-13A0A0B4J2D9 117 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 BTBD17A6NE02 478 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 IGKV1-13P0DP09 117 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 ELLP55199 621 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 HIKESHIQ53FT3 197 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 RIPPLY2Q5TAB7 128 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 GPR157Q5UAW9 335 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 GAPTQ8N292 157 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 OR1K1Q8NGR3 316 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 TVP23CQ96ET8 276 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 GALNT14Q96FL9 552 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 CCL28Q9NRJ3 127 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 GAB2Q9UQC2 676 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 NEURL1O76050 574 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 PPYP01298 95 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 G0S2P27469 103 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 FUT6P51993 359 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 ANKRD39Q53RE8 183 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 C6orf15Q6UXA7 325 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF818PQ6ZRF7 136 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 SLC25A26Q70HW3 274 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 C1orf210Q8IVY1 113 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 ODF3L1Q8IXM7 274 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 PACRGQ96M98 296 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 C1QTNF5Q9BXJ0 243 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 OR51B6Q9H340 312 aa10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 STRAPQ9Y3F4 350 aaKnown RBP10.75□□□□□ -0.69
SFSWAP-208ENST00000539506 OR5H1A6NKK0 313 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 MPPED1O15442 326 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 DEFA4P12838 97 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF16P17020 682 aaPredicted RBP10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 CD200P41217 278 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 CASP6P55212 293 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 RBM11P57052 281 aaKnown RBP10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 ERVS71-1P61550 626 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 RAB1AP62820 205 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SSPNQ14714 243 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF611Q8N823 705 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SPSB4Q96A44 273 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SPRY4Q9C004 299 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 BCO1Q9HAY6 547 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 LRFN1Q9P244 771 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SERPINA7P05543 415 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 HIST1H1BP16401 226 aaKnown RBP10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 ACP1P24666 158 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 DDTP30046 118 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 ECI1P42126 302 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 UCP2P55851 309 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 RTP5Q14D33 572 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 TESK1Q15569 626 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 COLCA1Q6ZS62 124 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SSX7Q7RTT5 188 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 OR4D5Q8NGN0 318 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 SYT3Q9BQG1 590 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 IL36GQ9NZH8 169 aa10.74□□□□□ -0.69
SFSWAP-208ENST00000539506 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 C9orf172C9J069 976 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 PMELP40967 661 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 LHX2P50458 406 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 ARF1P84077 181 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 STX12Q86Y82 276 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 TUSC5Q8IXB3 177 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 RNASE11Q8TAA1 199 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 FOXJ2Q9P0K8 574 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 MAP1BP46821 2468 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 TMEM238LA0A1B0GVL6 79 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 PDCD6O75340 191 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 IGHEP01854 428 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 IL2RGP31785 369 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 IL13RA2Q14627 380 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 COMMD1Q8N668 190 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF286AQ9HBT8 521 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 TECTAO75443 2155 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 CEBPZOSA8MTT3 80 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 BCL3P20749 454 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 ADIRFQ15847 76 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 TGIF2LXQ8IUE1 241 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 OR56B2PQ8NGI1 322 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 MOB3AQ96BX8 217 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF488Q96MN9 340 aa10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
SFSWAP-208ENST00000539506 CNOT4O95628 575 aaKnown RBP10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 METTL15P1P0C7V9 234 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 CLDN18P56856 261 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 PCBD1P61457 104 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 HLA-DRB3P79483 266 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 CLN3Q13286 438 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 IL22RA1Q8N6P7 574 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
SFSWAP-208ENST00000539506 ZNF703Q9H7S9 590 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms