RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 OR3A1P47881 315 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HTR5AP47898 357 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HLCSP50747 726 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 POLR2JP52435 117 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF136P52737 540 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CLDN15P56746 228 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 B3GALT5-AS1P59052 145 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SNRPEP62304 92 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RPL32P62910 135 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 GNGT1P63211 74 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DLK1P80370 383 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPS11P82912 194 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MS4A2Q01362 244 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 IFITM2Q01629 132 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 EWSR1Q01844 656 aaKnown RBP eCLIP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OC90Q02509 493 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SRYQ05066 204 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 PRKCDQ05655 676 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RIPPLY1Q0D2K3 151 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 PLA2G7Q13093 441 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 BTN1A1Q13410 526 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CEACAM7Q14002 265 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MAD2L1BPQ15013 274 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 EXOSC7Q15024 291 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CDK10Q15131 360 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NSDHLQ15738 373 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CD226Q15762 336 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF141Q15928 474 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NRF1Q16656 503 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DUSP5Q16690 384 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF630Q2M218 657 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TRMT5Q32P41 509 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TMEM176BQ3YBM2 270 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FFAR4Q5NUL3 377 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CLEC12AQ5QGZ9 265 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 LY6G6FQ5SQ64 297 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 AGAP7PQ5VUJ5 663 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 UBE2UQ5VVX9 321 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NANOGP8Q6NSW7 305 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DHRS4L2Q6PKH6 230 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DRAM2Q6UX65 266 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 C16orf47Q6ZP98 133 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SHISA6Q6ZSJ9 500 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TMPPEQ6ZT21 453 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF767PQ75MW2 155 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OLIG3Q7RTU3 272 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 TRPT1Q86TN4 253 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 LRRTM1Q86UE6 522 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CARM1Q86X55 608 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 COMMD2Q86X83 199 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RAB43Q86YS6 212 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DND1Q8IYX4 353 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 BEST3Q8N1M1 668 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SMIM20Q8N5G0 67 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 JAGN1Q8N5M9 183 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 C8orf31Q8N9H6 132 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF383Q8NA42 475 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NOXO1Q8NFA2 376 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2M7Q8NG81 312 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR11H1Q8NG94 326 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1M1Q8NGA1 313 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 GPR32P1Q8NGA4 272 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR4M2Q8NGB6 313 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR4D11Q8NGI4 311 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5L2Q8NGL0 311 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR4D5Q8NGN0 318 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR6N1Q8NGY5 312 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2AJ1Q8NGZ0 328 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR11H2Q8NH07 326 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2AE1Q8NHA4 323 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CASTOR1Q8WTX7 329 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FCAMRQ8WWV6 532 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ASB17Q8WXJ9 295 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 C11orf40Q8WZ69 217 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5P2Q8WZ92 322 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RAB8BQ92930 207 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 HIST1H2ACQ93077 130 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 PNPLA2Q96AD5 504 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ROPN1LQ96C74 230 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FLYWCH2Q96CP2 140 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 RAB39BQ96DA2 213 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPL53Q96EL3 112 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 AURKBQ96GD4 344 aaPredicted RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 KCTD7Q96MP8 289 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 GPR137Q96N19 417 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 AGAP4Q96P64 663 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MS4A4EQ96PG1 132 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NEDD4LQ96PU5 975 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR7D2Q96RA2 312 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8B4Q96RC9 309 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 MBOAT4Q96T53 435 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 CNN2Q99439 309 aaKnown RBP1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SDF2Q99470 211 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 LPAR4Q99677 370 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 DOK1Q99704 481 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 SIGMAR1Q99720 223 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 ATF6BQ99941 703 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 NDUFAF3Q9BU61 184 aa1.51□□□□□ -2.17
CBX3P4-201ENST00000538909 FAIM2Q9BWQ8 316 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms