RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 BAHCC1Q9P281 2608 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 TRBV6-6A0A0A6YYG2 114 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 A0A1B0GWJ7 208 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 C7orf77A4D0Y5 90 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 CLN5O75503 358 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 RPL35P42766 123 aaKnown RBP12.41□□□□□ -0.42
CDCA3-207ENST00000538862 ID3Q02535 119 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 HERPUD1Q15011 391 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 AWAT1Q58HT5 328 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 CMTM1Q8IZ96 169 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 BATF2Q8N1L9 274 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 C14orf79Q96F83 325 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 CRIM1Q9NZV1 1036 aa12.41□□□□□ -0.42
CDCA3-207ENST00000538862 FREM1Q5H8C1 2179 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 TRAV20A0A0B4J274 112 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 IGSF23A1L1A6 192 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 HSPA12AO43301 675 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 ADAM20O43506 726 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 MT-ND4LP03901 98 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 CCL2P13500 99 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 PTAFRP25105 342 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 RAB1AP62820 205 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 VAMP2P63027 116 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 BAXQ07812 192 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 C9orf135Q5VTT2 229 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 TMEM182Q6ZP80 229 aaPredicted RBP12.4□□□□□ -0.42
CDCA3-207ENST00000538862 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 FDCSPQ8NFU4 85 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 OR5D13Q8NGL4 314 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 FAM213BQ8TBF2 198 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 NEK7Q8TDX7 302 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 HIST1H2BAQ96A08 127 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 APH1AQ96BI3 265 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 SIGLEC12Q96PQ1 595 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 HS3ST6Q96QI5 342 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 ABI3Q9P2A4 366 aa12.4□□□□□ -0.42
CDCA3-207ENST00000538862 IGKV1D-13A0A0B4J2D9 117 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 BTBD17A6NE02 478 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 H0Y980 276 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 CELA3AP09093 270 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 IGKV1-13P0DP09 117 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF44P15621 663 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 MEOX2P50222 304 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 PLP2Q04941 152 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 RHEBQ15382 184 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 DCAF10Q5QP82 559 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 ETV3LQ6ZN32 361 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 OR2G3Q8NGZ4 309 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 OR5P3Q8WZ94 311 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 MPC1Q9Y5U8 109 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 OR5B21A6NL26 309 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 CD300LBA8K4G0 201 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 C1orf196B1AJZ1 125 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 ATP6V0CP27449 155 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 S100GP29377 79 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 FOXG1P55316 489 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 CLINT1Q14677 625 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 CXorf66Q5JRM2 361 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF573Q86YE8 665 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 MRPL30Q8TCC3 161 aaKnown RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 C2CD4CQ8TF44 421 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-207ENST00000538862 TTTY12Q9BZ98 90 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 CCL28Q9NRJ3 127 aa12.39□□□□□ -0.43
CDCA3-207ENST00000538862 SSSCA1O60232 199 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 NGFP01138 241 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 WNT2P09544 360 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
CDCA3-207ENST00000538862 OR1C1Q15619 314 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF880Q6PDB4 577 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF561Q8N587 486 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 ZNF552Q9H707 407 aaPredicted RBP12.38□□□□□ -0.43
CDCA3-207ENST00000538862 IL36RNQ9UBH0 155 aa12.38□□□□□ -0.43
CDCA3-207ENST00000538862 ANKRD30BLA7E2S9 258 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 M0R036 132 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 HSD17B6O14756 317 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 SYNGR1O43759 233 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 PGLYRP1O75594 196 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-207ENST00000538862 SLC25A6P12236 298 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 PLA2G2AP14555 144 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
CDCA3-207ENST00000538862 MAGEA5P43359 124 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 ASCL1P50553 236 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
CDCA3-207ENST00000538862 ZFP82Q8N141 532 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms