RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TSPAN5P62079 268 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 PAX5Q02548 391 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 ZNF273Q14593 569 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 Q5PR19 223 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 WDR25Q64LD2 544 aaPredicted RBP11.7□□□□□ -0.54
CD4-208ENST00000538827 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 GLCCI1Q86VQ1 547 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 OR4A4PQ8NGN8 299 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 ARL11Q969Q4 196 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 RAB39BQ96DA2 213 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 MBNL3Q9NUK0 354 aaKnown RBP11.7□□□□□ -0.54
CD4-208ENST00000538827 CALYQ9NYX4 217 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 LPAR3Q9UBY5 353 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 DOCK11Q5JSL3 2073 aa11.7□□□□□ -0.54
CD4-208ENST00000538827 NSD1Q96L73 2696 aaPredicted RBP11.69□□□□□ -0.54
CD4-208ENST00000538827 YLPM1P49750 1951 aaKnown RBP11.69□□□□□ -0.54
CD4-208ENST00000538827 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 SPINT2O43291 252 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 HSPA12AO43301 675 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 PTTG1O95997 202 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 HBZP02008 142 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 BTCP35070 178 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 NPY4RP50391 375 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 CCR6P51684 374 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
CD4-208ENST00000538827 TRIM16LQ309B1 348 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 IGSF11Q5DX21 431 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 VAX1Q5SQQ9 334 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 ZNF841Q6ZN19 808 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 Q6ZS49 121 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 BTN2A1Q7KYR7 527 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 LRRC75A-AS1Q8N1F1 130 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 OR51S1Q8NGJ8 323 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 DEDD2Q8WXF8 326 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 DPAGT1Q9H3H5 408 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 LINC00312Q9Y6C7 94 aa11.69□□□□□ -0.54
CD4-208ENST00000538827 FLNAP21333 2647 aaKnown RBP11.68□□□□□ -0.54
CD4-208ENST00000538827 TRBV23-1A0A0A0MS06 115 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 IGHV4-61A0A0C4DH41 118 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 POM121CA8CG34 1229 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 SPNP16150 400 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 CCL3L1P16619 93 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 MEF2CQ06413 473 aaPredicted RBP11.68□□□□□ -0.54
CD4-208ENST00000538827 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 NRARPQ7Z6K4 114 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 ZNF714Q96N38 554 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 SLC6A7Q99884 636 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 PRRT1Q99946 306 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 CABLES2Q9BTV7 478 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 GAL3ST2Q9H3Q3 398 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 OR1A1Q9P1Q5 309 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 ZNF69Q9UC07 566 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 SLC23A1Q9UHI7 598 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 SCP2D1Q9UJQ7 156 aa11.68□□□□□ -0.54
CD4-208ENST00000538827 UBE2J1Q9Y385 318 aaPredicted RBP11.68□□□□□ -0.54
CD4-208ENST00000538827 IGKV1-6A0A0C4DH72 117 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 ZNF729A6NN14 1252 aaPredicted RBP11.67□□□□□ -0.54
CD4-208ENST00000538827 VWC2LB2RUY7 222 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 HEXAP06865 529 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 SLC25A16P16260 332 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 NFYAP23511 347 aaPredicted RBP11.67□□□□□ -0.54
CD4-208ENST00000538827 OMGP23515 440 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 FXYD4P59646 89 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 HERV-K104P61576 105 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 LCN2P80188 198 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 GNMTQ14749 295 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 IDO2Q6ZQW0 420 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 OR10J5Q8NHC4 309 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 GALMQ96C23 342 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 ZNF2Q9BSG1 426 aaPredicted RBP11.67□□□□□ -0.54
CD4-208ENST00000538827 TMPRSS13Q9BYE2 586 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 ONECUT1Q9UBC0 465 aa11.67□□□□□ -0.54
CD4-208ENST00000538827 LOC105371242A0A075B767 164 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 FAM172BPA6NC97 362 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 C22orf46C9J442 243 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 C15orf65H3BRN8 121 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 DIRAS3O95661 229 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 PGAM2P15259 253 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 GZMHP20718 246 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 NFYBP25208 207 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 FCGR2CP31995 323 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
CD4-208ENST00000538827 TMEM200BQ69YZ2 307 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms