RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 C1orf159Q96HA4 380 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 SLC25A21Q9BQT8 299 aaPredicted RBP14.25□□□□□ -0.13
CLN6-202ENST00000538696 SSBP3Q9BWW4 388 aaPredicted RBP14.25□□□□□ -0.13
CLN6-202ENST00000538696 SHARPINQ9H0F6 387 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 FAM234AQ9H0X4 552 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 NECAP2Q9NVZ3 263 aa14.25□□□□□ -0.13
CLN6-202ENST00000538696 SLC25A10Q9UBX3 287 aaPredicted RBP14.25□□□□□ -0.13
CLN6-202ENST00000538696 A0A0A6YYJ9 748 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 TMEM30CPA0ZSE6 113 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 A8MXK9 166 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 TRDCB7Z8K6 153 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 FABP7O15540 132 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 PHF1O43189 567 aaPredicted RBP14.24□□□□□ -0.13
CLN6-202ENST00000538696 RLN1P04808 185 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 HEXAP06865 529 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 KCNJ3P48549 501 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 MECP2P51608 486 aaKnown RBP14.24□□□□□ -0.13
CLN6-202ENST00000538696 TSPAN5P62079 268 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 GNB2P62879 340 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 HLA-DRB3P79483 266 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 GRK1Q15835 563 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 ESCO2Q56NI9 601 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 LRRC10Q5BKY1 277 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 MOB1BQ7L9L4 216 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 LHFPL1Q86WI0 220 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 CLN8Q9UBY8 286 aa14.24□□□□□ -0.13
CLN6-202ENST00000538696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■□□□ 12.3
CLN6-202ENST00000538696 SMAD7O15105 426 aaKnown RBP14.23□□□□□ -0.13
CLN6-202ENST00000538696 SCTP09683 121 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 OR5H8P0DN80 308 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 NDUFB7P17568 137 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 RCC1P18754 421 aaPredicted RBP14.23□□□□□ -0.13
CLN6-202ENST00000538696 ZFP36P26651 326 aaKnown RBP14.23□□□□□ -0.13
CLN6-202ENST00000538696 NPY4RP50391 375 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 TMEM249Q2WGJ8 235 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 IGSF11Q5DX21 431 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 ZNF660Q6AZW8 331 aaPredicted RBP14.23□□□□□ -0.13
CLN6-202ENST00000538696 SLC35E4Q6ICL7 350 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 SPNS3Q6ZMD2 512 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 TMEM17Q86X19 198 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 ZDHHC22Q8N966 263 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 CHAC2Q8WUX2 184 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 SEC22CQ9BRL7 303 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 ZNF2Q9BSG1 426 aaPredicted RBP14.23□□□□□ -0.13
CLN6-202ENST00000538696 GHITMQ9H3K2 345 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 KIF25Q9UIL4 384 aa14.23□□□□□ -0.13
CLN6-202ENST00000538696 FLNAP21333 2647 aaKnown RBP14.22□□□□□ -0.13
CLN6-202ENST00000538696 IGKV1-6A0A0C4DH72 117 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 KIR2DS1A0A191URI9 304 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 OR5H14A6NHG9 310 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 MGST3O14880 152 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 IGHV4-31P0DP07 118 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 KIR2DS4P43632 304 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 LCN2P80188 198 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 AESQ08117 197 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 KIR2DS1Q14954 304 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 AADACL3Q5VUY0 350 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 TERB2Q8NHR7 220 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 PPP1R35Q8TAP8 253 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 MARCH1Q8TCQ1 289 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 DACT3Q96B18 629 aaPredicted RBP14.22□□□□□ -0.13
CLN6-202ENST00000538696 NEURL2Q9BR09 285 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 FXYD6Q9H0Q3 95 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 LPAR2Q9HBW0 351 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 ZNF221Q9UK13 617 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 TRAPPC2LQ9UL33 140 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 OTOGQ6ZRI0 2925 aa14.22□□□□□ -0.13
CLN6-202ENST00000538696 C22orf46C9J442 243 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 PRAF2O60831 178 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 FOXH1O75593 365 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 IL5P05113 134 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 CBX3Q13185 183 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 EDDM3AQ14507 147 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 KRBOX4Q5JUW0 171 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 GLDNQ6ZMI3 551 aaPredicted RBP14.21□□□□□ -0.13
CLN6-202ENST00000538696 TMED4Q7Z7H5 227 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 OR5D13Q8NGL4 314 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 OR6F1Q8NGZ6 308 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 DCTN5Q9BTE1 182 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 TMPRSS13Q9BYE2 586 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 OR51J1Q9H342 316 aa14.21□□□□□ -0.13
CLN6-202ENST00000538696 MBNL3Q9NUK0 354 aaKnown RBP14.21□□□□□ -0.13
CLN6-202ENST00000538696 ZNF469Q96JG9 3925 aaPredicted RBP14.21□□□□□ -0.14
CLN6-202ENST00000538696 HMX3A6NHT5 357 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 POM121CA8CG34 1229 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 FPR2P25090 351 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 FCGR2CP31995 323 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 GLP1RP43220 463 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 GLIPR1P48060 266 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 CD300CQ08708 224 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 HMGN3Q15651 99 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 TPRX1Q8N7U7 411 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 OR52B4Q8NGK2 314 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 OR4A4PQ8NGN8 299 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 UBALD1Q8TB05 177 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 CAPSLQ8WWF8 208 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 H1FXQ92522 213 aaKnown RBP14.2□□□□□ -0.14
CLN6-202ENST00000538696 CABLES2Q9BTV7 478 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 C19orf12Q9NSK7 152 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms