RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CENPVQ7Z7K6 275 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 SUMF1Q8NBK3 374 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 OR51G1Q8NGK1 321 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 PIGTQ969N2 578 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 LYZL4Q96KX0 146 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 PSMG3Q9BT73 122 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 CBLN4Q9NTU7 201 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 PIGLQ9Y2B2 252 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 SEMA4FO95754 770 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 HRASP01112 189 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 FAHP16930 419 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 VDAC1P21796 283 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 CDAP32320 146 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 P2RY6Q15077 328 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 SHHQ15465 462 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 ADIRFQ15847 76 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 ACTL10Q5JWF8 245 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 WDR25Q64LD2 544 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-209ENST00000538654 Q6ZSR6 202 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 GABRG3Q99928 467 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 SMIM7Q9BQ49 75 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 B3GAT1Q9P2W7 334 aa7.78□□□□□ -1.16
SNHG1-209ENST00000538654 A0A1W2PQF6 199 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 CEBPZOSA8MTT3 80 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 TP53I11O14683 189 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 PPYP01298 95 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 TYMSP04818 313 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 CRYGCP07315 174 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 MDKP21741 143 aaPredicted RBP7.77□□□□□ -1.16
SNHG1-209ENST00000538654 AADACP22760 399 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 SRP14P37108 136 aaKnown RBP7.77□□□□□ -1.16
SNHG1-209ENST00000538654 NPBWR2P48146 333 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 HNRNPKP61978 463 aaKnown RBP eCLIP7.77□□□□□ -1.16
SNHG1-209ENST00000538654 SERF2P84101 59 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 ZNF154Q13106 437 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 BSXQ3C1V8 233 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 NKAIN1Q4KMZ8 207 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.16
SNHG1-209ENST00000538654 TEX38Q6PEX7 206 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 GBGT1Q8N5D6 347 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 DEFB118Q96PH6 123 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 NUDT22Q9BRQ3 303 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 ZNF665Q9H7R5 613 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 GP6Q9HCN6 339 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 NAGKQ9UJ70 344 aa7.77□□□□□ -1.16
SNHG1-209ENST00000538654 HTTP42858 3142 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 HIST1H3AP68431 136 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 MALLQ13021 153 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM196Q5HYL7 178 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM211Q6ICI0 200 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 KCNIP4Q6PIL6 250 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF441Q8N8Z8 693 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 SLC24A4Q8NFF2 622 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 GJC3Q8NFK1 279 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 OR10J5Q8NHC4 309 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 DPF1Q92782 380 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 IL22RA2Q969J5 263 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 PINX1Q96BK5 328 aaKnown RBP7.77□□□□□ -1.17
SNHG1-209ENST00000538654 IMMP2LQ96T52 175 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 RPRMQ9NS64 109 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 HS3ST3A1Q9Y663 406 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 ATG2AQ2TAZ0 1938 aa7.77□□□□□ -1.17
SNHG1-209ENST00000538654 FAM90A20PA6NIJ5 464 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 F8WDY8 70 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TOX3O15405 576 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 CHST1O43916 411 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 KBTBD11O94819 623 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 EGR1P18146 543 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 SOX8P57073 446 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 RANP62826 216 aaKnown RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 NMSQ5H8A3 153 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TBC1D26Q86UD7 250 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 SFTPA2Q8IWL1 248 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 ODF3L1Q8IXM7 274 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 C12orf76Q8N812 135 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 OR2T10Q8NGZ9 312 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TECTBQ96PL2 329 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 RAB40CQ96S21 281 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 OR51I2Q9H344 312 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 BRCA2P51587 3418 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MAP1LC3B2A6NCE7 125 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MMP7P09237 267 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 HOXB2P14652 356 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 AREGP15514 252 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 UCP1P25874 307 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 CD1BP29016 333 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
SNHG1-209ENST00000538654 LCN2P80188 198 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 HIST3H3Q16695 136 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 DMRTC1Q5HYR2 192 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 LCN15Q6UWW0 184 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 BATF2Q8N1L9 274 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MRGPRX4Q96LA9 322 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 SIGLEC12Q96PQ1 595 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 MAP1LC3BQ9GZQ8 125 aa7.76□□□□□ -1.17
SNHG1-209ENST00000538654 OR6C3Q9NZP0 311 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms