RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CLEC18AA5D8T8 446 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 ANKRD30BLA7E2S9 258 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 HOXA4Q00056 320 aaPredicted RBP10.17□□□□□ -0.78
CPNE8-203ENST00000538596 SRSF7Q16629 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
CPNE8-203ENST00000538596 RNF212Q495C1 297 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 DCAF10Q5QP82 559 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 CLEC18CQ8NCF0 446 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 LFNGQ8NES3 379 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 ARRDC1-AS1Q9H2J1 176 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 IL17BQ9UHF5 180 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 OR2W1Q9Y3N9 320 aa10.17□□□□□ -0.78
CPNE8-203ENST00000538596 HSPA12AO43301 675 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 IL18BPO95998 194 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 MT-CO3P00414 261 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 IGKV1-39P01597 117 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 IGKV1D-39P04432 117 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 NQO2P16083 231 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 PLP2Q04941 152 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 RHEBQ15382 184 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 THNSL2Q86YJ6 484 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 CYB561D1Q8N8Q1 229 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 TUBA4BQ9H853 241 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 PPP1R3CQ9UQK1 317 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 MMP24Q9Y5R2 645 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 LAMA5O15230 3695 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 H3BQ15 152 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 SIRPB1O00241 398 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 TXNL1O43396 289 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 OR2C1O95371 312 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 IGLV2-14P01704 120 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 SERPINE2P07093 398 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 CELA3BP08861 270 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 COX5BP10606 129 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 IAPPP10997 89 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 ARR3P36575 388 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 ZNF343Q6P1L6 599 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
CPNE8-203ENST00000538596 RSG1Q9BU20 258 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 DEFB127Q9H1M4 99 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 KIAA1324LA8MWY0 1029 aaPredicted RBP10.16□□□□□ -0.78
CPNE8-203ENST00000538596 UBE2CO00762 179 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 SRP19P09132 144 aaKnown RBP10.16□□□□□ -0.78
CPNE8-203ENST00000538596 ZNF16P17020 682 aaPredicted RBP10.16□□□□□ -0.78
CPNE8-203ENST00000538596 APLNRP35414 380 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 ERVS71-1P61550 626 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 HLA-DRB3P79483 266 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 ICAM4Q14773 271 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 WDR86Q86TI4 376 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 MDP1Q86V88 176 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 MCEMP1Q8IX19 187 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 H1FOOQ8IZA3 346 aaPredicted RBP10.16□□□□□ -0.78
CPNE8-203ENST00000538596 RAB39BQ96DA2 213 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 STRADBQ9C0K7 418 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 VSIRQ9H7M9 311 aa10.16□□□□□ -0.78
CPNE8-203ENST00000538596 DEGS1O15121 323 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 CTXN2P0C2S0 81 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 ZNF806P0C7X5 589 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 MEOX1P50221 254 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 GNG3P63215 75 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 CLN3Q13286 438 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 ATP1A1-AS1Q5TC04 95 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 ATP5SQ99766 215 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 BCL2L14Q9BZR8 327 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 OR51I2Q9H344 312 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 CACNG5Q9UF02 275 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 URGCP-MRPS24S4R325 110 aa10.15□□□□□ -0.78
CPNE8-203ENST00000538596 CHD3Q12873 2000 aaKnown RBP10.15□□□□□ -0.79
CPNE8-203ENST00000538596 A0A1B0GW64 132 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.79
CPNE8-203ENST00000538596 OR8U8P0C7N1 319 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 CTAG1AP78358 180 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 ARL16Q0P5N6 197 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 ALKBH6Q3KRA9 238 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 SP5Q6BEB4 398 aaPredicted RBP10.15□□□□□ -0.79
CPNE8-203ENST00000538596 FAM53AQ6NSI3 398 aaPredicted RBP10.15□□□□□ -0.79
CPNE8-203ENST00000538596 ZNF573Q86YE8 665 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 KDF1Q8NAX2 398 aaPredicted RBP10.15□□□□□ -0.79
CPNE8-203ENST00000538596 OR1K1Q8NGR3 316 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 IFT22Q9H7X7 185 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 KIAA1456Q9P272 454 aa10.15□□□□□ -0.79
CPNE8-203ENST00000538596 M0R296 226 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 CNOT4O95628 575 aaKnown RBP10.14□□□□□ -0.79
CPNE8-203ENST00000538596 METTL15P1P0C7V9 234 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 BAXQ07812 192 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 HNF4GQ14541 408 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 TESK1Q15569 626 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 Q6P435 159 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 OR10V1Q8NGI7 309 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 USF3Q68DE3 2245 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 DUXBA0A1W2PPF3 345 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 LNP1A1A4G5 178 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 IGKV1-5P01602 117 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 TAGLN2P37802 199 aaKnown RBP10.14□□□□□ -0.79
CPNE8-203ENST00000538596 MPLP40238 635 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 CEBPDP49716 269 aaPredicted RBP10.14□□□□□ -0.79
CPNE8-203ENST00000538596 IL24Q13007 206 aa10.14□□□□□ -0.79
CPNE8-203ENST00000538596 NCMAPQ5T1S8 102 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms