RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 Q8N6K4 173 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 OR2T10Q8NGZ9 312 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 RFESDQ8TAC1 157 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 FBLIM1Q8WUP2 373 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 RTN4IP1Q8WWV3 396 aaPredicted RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 THRSPQ92748 146 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 ARL11Q969Q4 196 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 MRPS24Q96EL2 167 aaKnown RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 TMEM80Q96HE8 168 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 CNBD2Q96M20 576 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 ZNF184Q99676 751 aaPredicted RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 ABCG5Q9H222 651 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 CHCHD3Q9NX63 227 aaKnown RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 GFOD1Q9NXC2 390 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 BABAM2Q9NXR7 383 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 RCC2Q9P258 522 aaKnown RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 CLEC2DQ9UHP7 191 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 ING4Q9UNL4 249 aa6.83□□□□□ -1.32
DDB1-212ENST00000538470 DIMT1Q9UNQ2 313 aaKnown RBP6.83□□□□□ -1.32
DDB1-212ENST00000538470 PNMA8CA0A1B0GUJ8 204 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 FAM90A10PA6NDY2 464 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 FAM90A7PA6NKC0 464 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 FAM90A23PA8MXZ1 464 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 PTGES3LE9PB15 166 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 AIPO00170 330 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 SPINT2O43291 252 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 CA11O75493 328 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 CD1BP29016 333 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 GPR12P47775 334 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 HSPA13P48723 471 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 TAS2R43P59537 309 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 KRTAP10-11P60412 298 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ATAD3CQ5T2N8 411 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 DMKNQ6E0U4 476 aaPredicted RBP6.82□□□□□ -1.32
DDB1-212ENST00000538470 TEX38Q6PEX7 206 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 SLC25A48Q6ZT89 311 aaKnown RBP6.82□□□□□ -1.32
DDB1-212ENST00000538470 C8orf86Q6ZUL3 223 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 MOB3BQ86TA1 216 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ZNF695Q8IW36 515 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 CDH26Q8IXH8 852 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 GAPTQ8N292 157 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 TMEM104Q8NE00 496 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 NEK7Q8TDX7 302 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 GGHQ92820 318 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ST6GALNAC6Q969X2 333 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 EAF1Q96JC9 268 aaPredicted RBP6.82□□□□□ -1.32
DDB1-212ENST00000538470 NOL4LQ96MY1 436 aaPredicted RBP6.82□□□□□ -1.32
DDB1-212ENST00000538470 P2RX4Q99571 388 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ANKRD60Q9BZ19 345 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ZNF581Q9P0T4 197 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 PSORS1C1Q9UIG5 152 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 ZNF580Q9UK33 172 aa6.82□□□□□ -1.32
DDB1-212ENST00000538470 TRBV5-7A0A0A0MS05 114 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 WI2-2373I1.2A0A1W2PRP0 233 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 NCBP2LA6PVI3 153 aaKnown RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 MCRIP1C9JLW8 97 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 MYL12BO14950 172 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 MOSP00540 346 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 LALBAP00709 142 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 MT-ND4P03905 459 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 GLAP06280 429 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 ELANEP08246 267 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 OR5H8P0DN80 308 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 MYF6P23409 242 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 HOXD3P31249 432 aaPredicted RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 REG1BP48304 166 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 FOXE3Q13461 319 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 HNF4GQ14541 408 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 PNLIPRP3Q17RR3 467 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 SLC22A6Q4U2R8 563 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 CXorf66Q5JRM2 361 aaPredicted RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 C6orf141Q5SZD1 244 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 STEAP3Q658P3 488 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 UNQ9370/PRO34162Q6UXP9 181 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 ZNF554Q86TJ5 538 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 NKAIN3Q8N8D7 197 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 RNF152Q8N8N0 203 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 ZFP41Q8N8Y5 198 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 Q8N9W7 124 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 OR13C5Q8NGS8 318 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 OR8U1Q8NH10 309 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 PGLYRP3Q96LB9 341 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.81□□□□□ -1.32
DDB1-212ENST00000538470 ETAA1Q9NY74 926 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 CNOT2Q9NZN8 540 aaKnown RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 TRAPPC2LQ9UL33 140 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 MRPS28Q9Y2Q9 187 aaKnown RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 SIRT4Q9Y6E7 314 aaPredicted RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
DDB1-212ENST00000538470 TENM3Q9P273 2699 aa6.81□□□□□ -1.32
DDB1-212ENST00000538470 IGHV3-72A0A0B4J1Y9 119 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 TRAV39A0A0B4J263 110 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 A0A1W2PP11 408 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 A0A1W2PPE3 182 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 C12orf77C9JDV5 145 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 LANCL1O43813 399 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 RAMP3O60896 148 aa6.8□□□□□ -1.32
DDB1-212ENST00000538470 SC5DO75845 299 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms