RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 BORCS7-ASMTA0A0B4J1R7 106 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TM4SF5O14894 197 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 CEACAM1P13688 526 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 KITLGP21583 273 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TUBG1P23258 451 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 HMGN3Q15651 99 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 Q6ZR03 302 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 NKX6-2Q9C056 277 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TLNRD1Q9H1K6 362 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TUBG2Q9NRH3 451 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 UQCC1Q9NVA1 299 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TAAR3PQ9P1P4 343 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
LIMK1-208ENST00000538333 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
LIMK1-208ENST00000538333 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 TSPAN4O14817 238 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 PSPNO60542 156 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 HAND1O96004 215 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 LMO1P25800 156 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 F2RL1P55085 397 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 Q6ZRG5 221 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 TMEM231Q9H6L2 316 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 FAM212BQ9NTI7 297 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 PROCRQ9UNN8 238 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 HEATR1Q9H583 2144 aaKnown RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 IGHV2OR16-5A0A0B4J2B6 119 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 A0A0G2JRQ6 117 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 FAM24AA6NFZ4 105 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 WNT9BO14905 357 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 PITX3O75364 302 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 HEXAP06865 529 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 DANCRP0C864 163 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 S100GP29377 79 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 ID4P47928 161 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 P2RY6Q15077 328 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 GUCA2BQ16661 112 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 ZNF826PQ6ZT77 177 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 ODF3L1Q8IXM7 274 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 PUSL1Q8N0Z8 303 aaKnown RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 OR51H1Q8NH63 302 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 TSNAXQ99598 290 aaKnown RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 BCL2L14Q9BZR8 327 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 CXXC4Q9H2H0 198 aa11.82□□□□□ -0.52
LIMK1-208ENST00000538333 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
LIMK1-208ENST00000538333 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 A0A1B0GWJ7 208 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FAM74A7A6NL05 159 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SSSCA1O60232 199 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 TMEM50AO95807 157 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PSG2P11465 335 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PVALBP20472 110 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FAM74A3Q4VXF1 159 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 MBNL2Q5VZF2 373 aaKnown RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SVBPQ8N300 66 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PRR18Q8N4B5 295 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PARP12Q9H0J9 701 aaKnown RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FAM96BQ9Y3D0 163 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 IGKV1-39P01597 117 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 IGKV1D-39P04432 117 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 CD5P06127 495 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 MMP9P14780 707 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FIP1L1Q6UN15 594 aaKnown RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 WDR82Q6UXN9 313 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 Q6ZS92 163 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 BHLHA15Q7RTS1 189 aaPredicted RBP11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SPAG16Q8N0X2 631 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 TMEM252Q8N6L7 170 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FAM169BQ8N8A8 192 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 UBALD1Q8TB05 177 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 AKR1E2Q96JD6 320 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SEC11CQ9BY50 192 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SH3BGRL3Q9H299 93 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 PLEKHF2Q9H8W4 249 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 TREM1Q9NP99 234 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 FZR1Q9UM11 496 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 SLC25A15Q9Y619 301 aa11.81□□□□□ -0.52
LIMK1-208ENST00000538333 CHD3Q12873 2000 aaKnown RBP11.8□□□□□ -0.52
LIMK1-208ENST00000538333 F8W036 122 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 TIMM8AO60220 97 aaPredicted RBP11.8□□□□□ -0.52
LIMK1-208ENST00000538333 OR8U9P0C7N5 309 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 SLC25A6P12236 298 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
LIMK1-208ENST00000538333 ASCL1P50553 236 aa11.8□□□□□ -0.52
LIMK1-208ENST00000538333 ZNF718Q3SXZ3 478 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms