RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 BVESQ8NE79 360 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 OR13C5Q8NGS8 318 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 RAB3CQ96E17 227 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF837Q96EG3 531 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 HYLS1Q96M11 299 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DPCDQ9BVM2 203 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 RSPO3Q9BXY4 272 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 PPP1R3EQ9H7J1 279 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 NOX4Q9NPH5 578 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 G6PC2Q9NQR9 355 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 MED9Q9NWA0 146 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 WIPI2Q9Y4P8 454 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 KMT2BQ9UMN6 2715 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 LOC105371242A0A075B767 164 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 IGKV1D-43A0A0B4J1Z2 117 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 LOC100289279A0A1B0GTE1 492 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 A0A1B0GV72 72 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 TMEM30CPA0ZSE6 113 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DEGS1O15121 323 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 LMX1BO60663 402 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 MPZL1O95297 269 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 GRPP07492 148 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 OR8U8P0C7N1 319 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 PATE4P0C8F1 98 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 LIMS3P0CW19 117 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 LIMS4P0CW20 117 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 BRS3P32247 399 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 CDKN1AP38936 164 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 MMP15P51511 669 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 FOXG1P55316 489 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF616Q08AN1 781 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 IL18Q14116 193 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DGUOKQ16854 277 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DCAF12L2Q5VW00 463 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 B3GLCTQ6Y288 498 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 TMEM144Q7Z5S9 345 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 CEACAM19Q7Z692 300 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 MRPL41Q8IXM3 137 aaKnown RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 RFLNBQ8N5W9 214 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 HSD17B11Q8NBQ5 300 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 OR5R1Q8NH85 324 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 RXFP4Q8TDU9 374 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 GHSRQ92847 366 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 TMEM106AQ96A25 262 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 FGGYQ96C11 551 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 Q96MF0 132 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 FOXN4Q96NZ1 517 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 SCGB3A2Q96PL1 93 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 NRIP2Q9BQI9 281 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 SSBP3Q9BWW4 388 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DNAJC4Q9NNZ3 241 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 YAE1D1Q9NRH1 226 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 GPR173Q9NS66 373 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 RCC2Q9P258 522 aaKnown RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 FBLN5Q9UBX5 448 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 TBC1D24Q9ULP9 559 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 MRPS28Q9Y2Q9 187 aaKnown RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 UBE2J1Q9Y385 318 aaPredicted RBP3.02□□□□□ -1.93
PTPN22-211ENST00000538253 V9GY05 133 aa3.02□□□□□ -1.93
PTPN22-211ENST00000538253 DOPEY1Q5JWR5 2465 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 A0A1W2PPE3 182 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 FAM230AA0A1W2PPH8 454 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 J3QRE1 110 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 AIPO00170 330 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 ZNHIT1O43257 154 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CREBL2O60519 120 aaPredicted RBP3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CDC14BO60729 498 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 WISP2O76076 250 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 IGHV4-39P01824 125 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 MSMBP08118 114 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CELA3BP08861 270 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 PGA5P0DJD9 388 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 EPHA2P29317 976 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 POLR2IP36954 125 aaKnown RBP3.01□□□□□ -1.93
PTPN22-211ENST00000538253 MNDAP41218 407 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 FGF12P61328 243 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 RPL19P84098 196 aaKnown RBP3.01□□□□□ -1.93
PTPN22-211ENST00000538253 MAB21L1Q13394 359 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF404Q494X3 552 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 SPATA46Q5T0L3 261 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 AWAT2Q6E213 333 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CBLN2Q8IUK8 224 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 OSR2Q8N2R0 312 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 OR4K15Q8NH41 348 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CNIH3Q8TBE1 160 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 RPS4Y2Q8TD47 263 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 IGFBPL1Q8WX77 278 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 SDSLQ96GA7 329 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 HARBI1Q96MB7 349 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 ALKBH7Q9BT30 221 aaPredicted RBP3.01□□□□□ -1.93
PTPN22-211ENST00000538253 DPAGT1Q9H3H5 408 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 ONECUT1Q9UBC0 465 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 ING4Q9UNL4 249 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 PSG11Q9UQ72 335 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 HEATR5AQ86XA9 2040 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 TRBV5-7A0A0A0MS05 114 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 M0R143 59 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 CYB5BO43169 146 aa3.01□□□□□ -1.93
PTPN22-211ENST00000538253 SNAI2O43623 268 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms