RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 VWFP04275 2813 aa17.14■□□□□ 0.33
CCDC78-215ENST00000538176 TRAV39A0A0B4J263 110 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 CCRL2O00421 344 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 IGHV3-7P01780 117 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 CD37P11049 281 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 LOXL3P58215 753 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 TPBGQ13641 420 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 RBM48Q5RL73 367 aaKnown RBP17.13■□□□□ 0.33
CCDC78-215ENST00000538176 UTF1Q5T230 341 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 Q6ZS46 218 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 PRSS48Q7RTY5 328 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 TMEM104Q8NE00 496 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 OR5AU1Q8NGC0 362 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 KCNG3Q8TAE7 436 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 KCNIP1Q9NZI2 227 aa17.13■□□□□ 0.33
CCDC78-215ENST00000538176 A0A1W2PPI3 338 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 FGF16O43320 207 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 TXNL1O43396 289 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 PDCD6O75340 191 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 ARL6IP5O75915 188 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 BPNT1O95861 308 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 UCHL1P09936 223 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 CD28P10747 220 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 HES1Q14469 280 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 LRRTM1Q86UE6 522 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 DRAM1Q8N682 238 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 OR56B4Q8NH76 319 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 NEDD4LQ96PU5 975 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 BLOC1S6Q9UL45 172 aa17.12■□□□□ 0.33
CCDC78-215ENST00000538176 HSD17B6O14756 317 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 SNRNP70P08621 437 aaKnown RBP17.11■□□□□ 0.33
CCDC78-215ENST00000538176 CRHBPP24387 322 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 HTR2CP28335 458 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 MLLT11Q13015 90 aaPredicted RBP17.11■□□□□ 0.33
CCDC78-215ENST00000538176 EBI3Q14213 229 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 LIPKQ5VXJ0 399 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 MBNL3Q9NUK0 354 aaKnown RBP17.11■□□□□ 0.33
CCDC78-215ENST00000538176 GNG12Q9UBI6 72 aa17.11■□□□□ 0.33
CCDC78-215ENST00000538176 C12orf77C9JDV5 145 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 MPIG6BO95866 241 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 AMY1AP04745 511 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 AMY2AP04746 511 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 HSMCR30P0CW71 290 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 TMEM11P17152 192 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 PSMD7P51665 324 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 GP2P55259 537 aaKnown RBP17.1■□□□□ 0.33
CCDC78-215ENST00000538176 CD83Q01151 205 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 INSL4Q14641 139 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 PDLIM3Q53GG5 364 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-215ENST00000538176 OR4X2Q8NGF9 303 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 OR6M1Q8NGM8 313 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 OR4K15Q8NH41 348 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 CITED2Q99967 270 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-215ENST00000538176 TMEM59Q9BXS4 323 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 CCDC90BQ9GZT6 254 aa17.1■□□□□ 0.33
CCDC78-215ENST00000538176 IGHV1-3A0A0C4DH29 117 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 SLC22A1O15245 554 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 KCNAB3O43448 404 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 VSIG8P0DPA2 414 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 CPEP16870 476 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 RPS27AP62979 156 aaKnown RBP17.09■□□□□ 0.33
CCDC78-215ENST00000538176 NSUN5P1Q3KNT7 163 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 FAM27D1Q5T7N8 215 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 SIGIRRQ6IA17 410 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 SLC25A48Q6ZT89 311 aaKnown RBP17.09■□□□□ 0.33
CCDC78-215ENST00000538176 MOB3BQ86TA1 216 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 FAM46BQ96A09 425 aa17.09■□□□□ 0.33
CCDC78-215ENST00000538176 A0A1W2PPE3 182 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 UBE2QL1A1L167 161 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 HBZP02008 142 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 CD1BP29016 333 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 ZNF137PP52743 207 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 HTD2P86397 168 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 IZUMO2Q6UXV1 221 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 IZUMO1Q8IYV9 350 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 OR2T10Q8NGZ9 312 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 ST6GALNAC6Q969X2 333 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 R3HDM4Q96D70 268 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 MGLLQ99685 303 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 URM1Q9BTM9 101 aaKnown RBP17.08■□□□□ 0.32
CCDC78-215ENST00000538176 TM2D1Q9BX74 207 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 RIMS4Q9H426 269 aaPredicted RBP17.08■□□□□ 0.32
CCDC78-215ENST00000538176 TAF9BQ9HBM6 251 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 ACOT13Q9NPJ3 140 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 OR2S2Q9NQN1 319 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 RAB26Q9ULW5 256 aa17.08■□□□□ 0.32
CCDC78-215ENST00000538176 TSSC4Q9Y5U2 329 aaPredicted RBP17.08■□□□□ 0.32
CCDC78-215ENST00000538176 ERICH4A6NGS2 130 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 RGS11O94810 467 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 IGKV1D-33P01593 117 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 IGKV1-33P01594 117 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 RCC1P18754 421 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-215ENST00000538176 DIAPH2-AS1Q14236 149 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 TMEM95Q3KNT9 176 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 C9orf152Q5JTZ5 239 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 LY6G6FQ5SQ64 297 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 OR8H1Q8NGG4 311 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 RTN4IP1Q8WWV3 396 aaPredicted RBP17.07■□□□□ 0.32
CCDC78-215ENST00000538176 SGCDQ92629 289 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 TMEM203Q969S6 136 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms