RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PITPNC1Q9UKF7 332 aa10.4□□□□□ -0.74
CPSF7-218ENST00000537641 SPEGQ15772 3267 aa10.4□□□□□ -0.75
CPSF7-218ENST00000537641 COL27A1Q8IZC6 1860 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-218ENST00000537641 PHOX2AO14813 284 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 PGLYRP1O75594 196 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-218ENST00000537641 PAX1P15863 534 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 BCL3P20749 454 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 F2RP25116 425 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 CEACAM16Q2WEN9 425 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 C1orf210Q8IVY1 113 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 CA5BP1Q8WTZ4 195 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
CPSF7-218ENST00000537641 GPR146Q96CH1 333 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 AGMATQ9BSE5 352 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 GPR35Q9HC97 309 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 VAX2Q9UIW0 290 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 ARID1AO14497 2285 aa10.39□□□□□ -0.75
CPSF7-218ENST00000537641 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 KIAA1324LA8MWY0 1029 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 IGHEP01854 428 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 MMP7P09237 267 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 FOLR3P41439 243 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 RPS18P62269 152 aaKnown RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 SERF2P84101 59 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 GAMTQ14353 236 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 GFI1BQ5VTD9 330 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 CDCP2Q5VXM1 449 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 MRGPRGQ86SM5 289 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 GGNQ86UU5 652 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF295-AS1Q8N0V1 137 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 PINX1Q96BK5 328 aaKnown RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 CABLES2Q9BTV7 478 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 PLK3Q9H4B4 646 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 SRD5A3Q9H8P0 318 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 RPRMQ9NS64 109 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 TNRC6AQ8NDV7 1962 aaKnown RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 IGKV1-6A0A0C4DH72 117 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 ZFP92A6NM28 416 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 B4E171 279 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 MKRN2OSH3BPM6 223 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 DVL1O14640 695 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 PATE4P0C8F1 98 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 FABP4P15090 132 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 DDTP30046 118 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 NTF4P34130 210 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 TSPAN7P41732 249 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 CARD18P57730 90 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 MLF1P58340 268 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 PRDX4Q13162 271 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 SSX9Q7RTT3 188 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 RPS19BP1Q86WX3 136 aaKnown RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 TMEM183AQ8IXX5 376 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 MKXQ8IYA7 352 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 ZDHHC23Q8IYP9 409 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF525Q8N782 197 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 RNASE11Q8TAA1 199 aaKnown RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 PACRGQ96M98 296 aaPredicted RBP10.38□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 LRFN1Q9P244 771 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 SHANK1Q9Y566 2161 aa10.38□□□□□ -0.75
CPSF7-218ENST00000537641 A0A0G2JRQ6 117 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 TRAPPC2LH3BP13 241 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 DEGS1O15121 323 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 MDH2P40926 338 aaKnown RBP10.37□□□□□ -0.75
CPSF7-218ENST00000537641 HBG1P69891 147 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 HBG2P69892 147 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 TMEM267Q0VDI3 215 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-218ENST00000537641 LRRC75BQ2VPJ9 315 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF880Q6PDB4 577 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 PCSK4Q6UW60 755 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 TGIF2LYQ8IUE0 185 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 FGFBP3Q8TAT2 258 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 MRPL30Q8TCC3 161 aaKnown RBP10.37□□□□□ -0.75
CPSF7-218ENST00000537641 RNASEH2CQ8TDP1 164 aaKnown RBP10.37□□□□□ -0.75
CPSF7-218ENST00000537641 TMEM45BQ96B21 275 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 ADGRG7Q96K78 797 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 HIST1H2BLQ99880 126 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 OR2W1Q9Y3N9 320 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 TIMM9Q9Y5J7 89 aa10.37□□□□□ -0.75
CPSF7-218ENST00000537641 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 G3V3Y1 287 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 NXPH3O95157 252 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 COX5BP10606 129 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 FGF7P21781 194 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 ACP1P24666 158 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 JOSD1Q15040 202 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF726P1Q15940 193 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 CEACAM21Q3KPI0 293 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF324BQ6AW86 544 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-218ENST00000537641 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 OR10A7Q8NGE5 316 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 NEK7Q8TDX7 302 aa10.36□□□□□ -0.75
CPSF7-218ENST00000537641 ZNF845Q96IR2 970 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms