RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 RFESDQ8TAC1 157 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 GPR148Q8TDV2 347 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 TNFAIP8L1Q8WVP5 186 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 ISG20L2Q9H9L3 353 aaKnown RBP8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 FGF20Q9NP95 211 aaPredicted RBP8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 FAM118AQ9NWS6 357 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 CSMD3Q7Z407 3707 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 RYR2Q92736 4967 aa8.75□□□□□ -1.01
CLSTN3-206ENST00000535668 MAGEB3O15480 346 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 OGG1O15527 345 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 HLA-DRB1P01911 266 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 IGFBP3P17936 291 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 IL3RAP26951 378 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 SOX6P35712 828 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 GPR176Q14439 515 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 C19orf54Q5BKX5 351 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF429Q86V71 674 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 MINDY2Q8NBR6 621 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 OR51A2Q8NGJ7 313 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 OR52N1Q8NH53 320 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 LEAP2Q969E1 77 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 PDCD1LG2Q9BQ51 273 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 METTL9Q9H1A3 318 aa8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 MBNL3Q9NUK0 354 aaKnown RBP8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF256Q9Y2P7 627 aaPredicted RBP8.74□□□□□ -1.01
CLSTN3-206ENST00000535668 OR8U8P0C7N1 319 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 GTF2F2P13984 249 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 DCKP27707 260 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF93P35789 620 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 HSPA13P48723 471 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 LUMP51884 338 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF134P52741 427 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 GBX2P52951 348 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 HNF4GQ14541 408 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 RCN1Q15293 331 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 LHFPL3Q86UP9 236 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF491Q8N8L2 437 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 NPBQ8NG41 125 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 TFAP2CQ92754 450 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 ARL11Q969Q4 196 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 TMEM106AQ96A25 262 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 NR1H4Q96RI1 486 aaPredicted RBP8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 S100A14Q9HCY8 104 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 LINC00527Q9UJ94 153 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 RPL36Q9Y3U8 105 aaKnown RBP8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 ORC6Q9Y5N6 252 aa8.73□□□□□ -1.01
CLSTN3-206ENST00000535668 TRBV5-5A0A0J9YX44 114 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 NCBP2LA6PVI3 153 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 A8MZ25 164 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 SEC14L6B5MCN3 397 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 C12orf77C9JDV5 145 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 H3BNX3 289 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 SDCBPO00560 298 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 EI24O14681 340 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 GEMIN2O14893 280 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 CASQ2O14958 399 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ARPC1BO15143 372 aaKnown RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 FSTP19883 344 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 F2RL1P55085 397 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 HTD2P86397 168 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ASPHD1Q5U4P2 390 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 MOB3BQ86TA1 216 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF485Q8NCK3 441 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 KCTD7Q96MP8 289 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 RDH12Q96NR8 316 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF184Q99676 751 aaPredicted RBP8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 RASL11BQ9BPW5 248 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 HSPB9Q9BQS6 159 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 VCXQ9H320 206 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 Q9H521 79 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 TPSG1Q9NRR2 321 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 VSIG4Q9Y279 399 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 SMAD5-AS1Q9Y6J3 95 aa8.72□□□□□ -1.01
CLSTN3-206ENST00000535668 ZNF736B4DX44 427 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 HSPB6O14558 160 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 SPINT2O43291 252 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 NDUFA3O95167 84 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 IGHV3-7P01780 117 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 CSTBP04080 98 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 CD1AP06126 327 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 VDAC1P21796 283 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 BDKRB2P30411 391 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 GNG10P50151 68 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF616Q08AN1 781 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 LSAMPQ13449 338 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 CASC10Q5T4H9 136 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 C6orf183Q5T699 404 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 FAM71F2Q6NXP2 309 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 TCTEX1D1Q8N7M0 179 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 OR11H1Q8NG94 326 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 MUC7Q8TAX7 377 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 APH1BQ8WW43 257 aa8.71□□□□□ -1.02
CLSTN3-206ENST00000535668 SMIM19Q96E16 107 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms