RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TRIM25Q14258 630 aaKnown RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 ACTBL2Q562R1 376 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 RSBN1Q5VWQ0 802 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 PYHIN1Q6K0P9 492 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 C8orf82Q6P1X6 216 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 FAHD1Q6P587 224 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 CPOQ8IVL8 374 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 GVQW1Q8N7I0 195 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 TCTEX1D1Q8N7M0 179 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 C8orf31Q8N9H6 132 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 DNAAF1Q8NEP3 725 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 OR2K2Q8NGT1 345 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 PLPPR1Q8TBJ4 325 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF251Q9BRH9 671 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 FAM103A1Q9BTL3 118 aaKnown RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 TMBIM4Q9HC24 238 aa6.18□□□□□ -1.42
CLIP1-206ENST00000535290 V9GYY5 206 aaPredicted RBP6.18□□□□□ -1.42
CLIP1-206ENST00000535290 LOC102724200A0A096LPH7 203 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 H0YJX3 145 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 C15orf65H3BRN8 121 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 TNFRSF11BO00300 401 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SDCBPO00560 298 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 FCN1O00602 326 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 PRODHO43272 600 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 TXNL1O43396 289 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SYT7O43581 403 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 MITFO75030 526 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 KRT36O76013 467 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 CCNB2O95067 398 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SERPINA3P01011 423 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 TRBV12-3P01733 135 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 FABP3P05413 133 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SLC2A5P22732 501 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 MAGEA2P43356 314 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 ALDH3A2P51648 485 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF137PP52743 207 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 NANOS2P60321 138 aaKnown RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 GUCA2BQ16661 112 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 DEFB135Q30KP9 77 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 PAN3Q58A45 887 aaKnown RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF660Q6AZW8 331 aaPredicted RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 CD200R1LQ6Q8B3 271 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 UNQ5815/PRO19632Q6UWF5 114 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SLC25A48Q6ZT89 311 aaKnown RBP6.17□□□□□ -1.42
CLIP1-206ENST00000535290 PPP1R27Q86WC6 154 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 LFNGQ8NES3 379 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 OR5D18Q8NGL1 313 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 ABHD5Q8WTS1 349 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 ASB17Q8WXJ9 295 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 MCUR1Q96AQ8 359 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 RDH12Q96NR8 316 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 FANCD2OSQ96PS1 177 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 BARHL1Q9BZE3 327 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 CST11Q9H112 138 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SLA2Q9H6Q3 261 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 MOB1AQ9H8S9 216 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 GFOD1Q9NXC2 390 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 GAB2Q9UQC2 676 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 SNX5Q9Y5X3 404 aa6.17□□□□□ -1.42
CLIP1-206ENST00000535290 C13orf42A0A1B0GVH6 325 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 TMEM267Q0VDI3 215 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 DEFB114Q30KQ6 69 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 AKIRIN2Q53H80 203 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 CT45A1Q5HYN5 189 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 SLC35D3Q5M8T2 416 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF322Q6U7Q0 402 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 Q6ZWC4 215 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 Q8N1X5 172 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 TMEM217Q8N7C4 229 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF645Q8N7E2 425 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 ZNF439Q8NDP4 499 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 NPBQ8NG41 125 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 OR52M1Q8NGK5 317 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 CT45A3Q8NHU0 189 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 TEX47Q8TBZ9 253 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 ARL11Q969Q4 196 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 ADAT3Q96EY9 351 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 NR1H4Q96RI1 486 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 NIPSNAP1Q9BPW8 284 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 HOPXQ9BPY8 73 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-206ENST00000535290 DGCR6LQ9BY27 220 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 FBXL15Q9H469 300 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 FBXL17Q9UF56 701 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 SELENOKQ9Y6D0 94 aa6.16□□□□□ -1.42
CLIP1-206ENST00000535290 CCDC182A6NF36 153 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 H3BN98 237 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 LANCL1O43813 399 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 EDF1O60869 148 aaKnown RBP6.15□□□□□ -1.42
CLIP1-206ENST00000535290 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 OR2A4O95047 310 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 RPP14O95059 124 aaKnown RBP6.15□□□□□ -1.42
CLIP1-206ENST00000535290 NDUFA3O95167 84 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 ATF1P18846 271 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 GZMHP20718 246 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 EDN2P20800 178 aa6.15□□□□□ -1.42
CLIP1-206ENST00000535290 CD40LGP29965 261 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms