RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 UBE2J2Q8N2K1 259 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 UBALD1Q8TB05 177 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 GPR151Q8TDV0 419 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 GPR119Q8TDV5 335 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 ITFG2Q969R8 447 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 MUCL1Q96DR8 90 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 CENPKQ9BS16 269 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 MRPL37Q9BZE1 423 aaKnown RBP3.67□□□□□ -1.82
CASP4-213ENST00000534356 TBL1XR1Q9BZK7 514 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 SDHAF3Q9NRP4 125 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 DDX18Q9NVP1 670 aaKnown RBP3.67□□□□□ -1.82
CASP4-213ENST00000534356 IKZF2Q9UKS7 526 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 TIMM22Q9Y584 194 aa3.67□□□□□ -1.82
CASP4-213ENST00000534356 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 A0A0B4J2A0 478 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 IGHV1-18A0A0C4DH31 117 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 PGRMC1O00264 195 aaKnown RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 KCNK2O95069 426 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 TACSTD2P09758 323 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 OR4A8P0C604 315 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 CRYBB2P43320 205 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 CCNG1P51959 295 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 ACTA2P62736 377 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 ACTC1P68032 377 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 MOBPQ13875 183 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 LY6G6FQ5SQ64 297 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 C3orf62Q6ZUJ4 267 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 LRP11Q86VZ4 500 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 FAM9CQ8IZT9 166 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 PGAM4Q8N0Y7 254 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 SLC35F6Q8N357 371 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 OR10G4Q8NGN3 311 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 CLDND2Q8NHS1 167 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 YIPF5Q969M3 257 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 DOK1Q99704 481 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 FAIMQ9NVQ4 179 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 TAS2R9Q9NYW1 312 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 PDP1Q9P0J1 537 aaPredicted RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 SHPKQ9UHJ6 478 aa3.66□□□□□ -1.82
CASP4-213ENST00000534356 POLR3HQ9Y535 204 aaPredicted RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
CASP4-213ENST00000534356 TRAV39A0A0B4J263 110 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 GNG14A0A1W2PPG7 69 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 KLHL2O95198 593 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ADRA2AP08913 450 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 MRPL3P09001 348 aaKnown RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 GNAO1P09471 354 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 HRH1P35367 487 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 PLP1P60201 277 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 UBA52P62987 128 aaKnown RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 IFT88Q13099 833 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 MAD2L1BPQ15013 274 aaPredicted RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 QPRTQ15274 297 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 POU2AF1Q16633 256 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ALKBH6Q3KRA9 238 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 AVPI1Q5T686 147 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 FBXW9Q5XUX1 488 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 PAGE2Q7Z2X7 111 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ZIC4Q8N9L1 334 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 OR5W2Q8NH69 310 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 CLHC1Q8NHS4 586 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 PLPPR1Q8TBJ4 325 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 AGR3Q8TD06 166 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 CDS1Q92903 461 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 CPNE4Q96A23 557 aaPredicted RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 ARL5BQ96KC2 179 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 P2RX4Q99571 388 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 NDFIP1Q9BT67 221 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 SHCBP1LQ9BZQ2 653 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ELOVL6Q9H5J4 265 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ZNF430Q9H8G1 570 aaPredicted RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 CA10Q9NS85 328 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 AHSPQ9NZD4 102 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 MYEF2Q9P2K5 600 aaKnown RBP3.65□□□□□ -1.83
CASP4-213ENST00000534356 VPS29Q9UBQ0 182 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 OPN4Q9UHM6 478 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 ZNF222Q9UK12 451 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 PSME2Q9UL46 239 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 PSG8Q9UQ74 426 aa3.65□□□□□ -1.83
CASP4-213ENST00000534356 CLDN24A6NM45 220 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 A8MT66 165 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 hCG_2039718K7EN88 272 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 NDUFS8O00217 210 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 PPP1R2P9O14990 202 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 RPS17P08708 135 aaKnown RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 CECR9P0C854 216 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 CRABP2P29373 138 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 IFNA8P32881 189 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 MPIP34949 423 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 IDH3GP51553 393 aaPredicted RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 PRRX1P54821 245 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 NUTF2P61970 127 aaKnown RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 DR1Q01658 176 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 UAP1Q16222 522 aaPredicted RBP3.64□□□□□ -1.83
CASP4-213ENST00000534356 SPRNQ5BIV9 151 aa3.64□□□□□ -1.83
CASP4-213ENST00000534356 DUX4L9Q6RFH8 374 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms