RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 OPN1MW2P0DN77 364 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 OPN1MW3P0DN78 364 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 GTF2F2P13984 249 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 MYF6P23409 242 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 CNTFRP26992 372 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 OR3A3P47888 321 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 PRRX1P54821 245 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 FABP5Q01469 135 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 PAX5Q02548 391 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 SPHARQ15513 63 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 SSX1Q16384 188 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 NKAPLQ5M9Q1 402 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 SAMD5Q5TGI4 173 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 C11orf88Q6PI97 169 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 IZUMO2Q6UXV1 221 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 LIAT1Q6ZQX7 453 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 MOB3BQ86TA1 216 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 ODF3L1Q8IXM7 274 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 GAPTQ8N292 157 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 C5orf56Q8N8D9 126 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 ZNF565Q8N9K5 539 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 MYDGFQ969H8 173 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 TOMM40LQ969M1 308 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 RPEQ96AT9 228 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 R3HDM4Q96D70 268 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 DUX3Q96PT4 197 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 NCOR1P1Q9H4R4 102 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 RAB18Q9NP72 206 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 ETAA1Q9NY74 926 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 AK6Q9Y3D8 172 aaKnown RBP7.62□□□□□ -1.19
SSBP3-215ENST00000533946 FUOMA2VDF0 154 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 SMIM30A4D0T7 59 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 H0YHG0 523 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 HSD17B6O14756 317 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 SOCS1O15524 211 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 CD1AP06126 327 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 UCHL1P09936 223 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 HSMCR30P0CW71 290 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 CD37P11049 281 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 IGLL1P15814 213 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 CRHBPP24387 322 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 CHATP28329 748 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 PPP1CCP36873 323 aaKnown RBP7.61□□□□□ -1.19
SSBP3-215ENST00000533946 OR10A3P58181 314 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 HES1Q14469 280 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 MPV17LQ2QL34 196 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 ARSJQ5FYB0 599 aaPredicted RBP7.61□□□□□ -1.19
SSBP3-215ENST00000533946 RBM48Q5RL73 367 aaKnown RBP7.61□□□□□ -1.19
SSBP3-215ENST00000533946 C1orf100Q5SVJ3 147 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 RNLSQ5VYX0 342 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 ETV3LQ6ZN32 361 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 Q8N6K4 173 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
SSBP3-215ENST00000533946 CNBD2Q96M20 576 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 HSPB9Q9BQS6 159 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 MND1Q9BWT6 205 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 LIN7BQ9HAP6 207 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 TAF9BQ9HBM6 251 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 C8orf4Q9NR00 106 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 ERGIC3Q9Y282 383 aa7.61□□□□□ -1.19
SSBP3-215ENST00000533946 FOXI3A8MTJ6 420 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-215ENST00000533946 TMEM14DPA8MWL7 114 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 CCRL2O00421 344 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 TMEM11P17152 192 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 SRMP19623 302 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 TMEM50BP56557 158 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 KRTAP10-11P60412 298 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 MADCAM1Q13477 382 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 CENPVQ7Z7K6 275 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-215ENST00000533946 NR2C2APQ86WQ0 139 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 Q8N9W7 124 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 OR10X1Q8NGY0 326 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 HAVCR2Q8TDQ0 301 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 RTN4IP1Q8WWV3 396 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-215ENST00000533946 MYCBPQ99417 103 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-215ENST00000533946 S100A13Q99584 98 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 ANKRD60Q9BZ19 345 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 CCDC90BQ9GZT6 254 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 LPAR5Q9H1C0 372 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 CKLFQ9UBR5 152 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 PITPNC1Q9UKF7 332 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 ELF5Q9UKW6 265 aaPredicted RBP7.6□□□□□ -1.19
SSBP3-215ENST00000533946 TRAPPC2LQ9UL33 140 aa7.6□□□□□ -1.19
SSBP3-215ENST00000533946 TCRBV4S1A1TA0A5B7 111 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 MCRIP1C9JLW8 97 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 SLC22A1O15245 554 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 RGS10O43665 173 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 PDCD6O75340 191 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 PROP1O75360 226 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 CD3GP09693 182 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 FUT3P21217 361 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 BRS3P32247 399 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 KCNJ3P48549 501 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 TAS2R43P59537 309 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 RPS27AP62979 156 aaKnown RBP7.59□□□□□ -1.19
SSBP3-215ENST00000533946 ZNF816Q0VGE8 651 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-215ENST00000533946 GPR50Q13585 617 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 TPBGQ13641 420 aa7.59□□□□□ -1.19
SSBP3-215ENST00000533946 EBI3Q14213 229 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms