RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 ZNF780AO75290 641 aaPredicted RBP6.28□□□□□ -1.4
CASP4-212ENST00000533730 SC5DO75845 299 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 IFNA2P01563 188 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 UCHL1P09936 223 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 PRKACAP17612 351 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 BCL3P20749 454 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 GALP22466 123 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 PTGFRP43088 359 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ZP1P60852 638 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 SNRPEP62304 92 aaKnown RBP6.28□□□□□ -1.4
CASP4-212ENST00000533730 PAX2Q02962 417 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 PAX8Q06710 450 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 GPR176Q14439 515 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ZNF146Q15072 292 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 RSU1Q15404 277 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 HSD17B12Q53GQ0 312 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ARMCX4Q5H9R4 360 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 UBE2UQ5VVX9 321 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ELP2Q6IA86 826 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ASPHD2Q6ICH7 369 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 C1QL2Q7Z5L3 287 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 CEACAM19Q7Z692 300 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 PHC2Q8IXK0 858 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 KIR3DL3Q8N743 410 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 FAM216BQ8N7L0 139 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 TMEM185AQ8NFB2 350 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 OR51A2Q8NGJ7 313 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 OR5D18Q8NGL1 313 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 OR5D13Q8NGL4 314 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 C8orf46Q8TAG6 207 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 NANPQ8TBE9 248 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 TNFAIP8L1Q8WVP5 186 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 UQCC2Q9BRT2 126 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 FAM192AQ9GZU8 254 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 HMG20AQ9NP66 347 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 NOX4Q9NPH5 578 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 NDUFB11Q9NX14 153 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 IL36GQ9NZH8 169 aa6.28□□□□□ -1.4
CASP4-212ENST00000533730 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
CASP4-212ENST00000533730 ABCA2Q9BZC7 2435 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 MALRD1Q5VYJ5 2156 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 TRAV8-7A0A075B6U6 113 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 A0A087WXM4 84 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 IGKV1-12A0A0C4DH73 117 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 FUOMA2VDF0 154 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 J3QR06 171 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 K7N7A8 449 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 CCRL2O00421 344 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 PIN1P1O15428 100 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 ANGPTL7O43827 346 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 HAND1O96004 215 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 IGKV1D-12P01611 117 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 MAS1P04201 325 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 SRMP19623 302 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 PSMB9P28065 219 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 NPBWR2P48146 333 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 PSMD7P51665 324 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 FGF12P61328 243 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 DGUOKQ16854 277 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 METTL11BQ5VVY1 283 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 GLT8D1Q68CQ7 371 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 JAGN1Q8N5M9 183 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 CD177Q8N6Q3 437 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 ASCC1Q8N9N2 400 aaKnown RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 CHST4Q8NCG5 386 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 ZNRF1Q8ND25 227 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 H1FXQ92522 213 aaKnown RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 TMEM203Q969S6 136 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 MRPS24Q96EL2 167 aaKnown RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 DCTN5Q9BTE1 182 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 METTL9Q9H1A3 318 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 ELL3Q9HB65 397 aaPredicted RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 EXOSC4Q9NPD3 245 aaKnown RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 MMP26Q9NRE1 261 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 RBFOX1Q9NWB1 397 aaKnown RBP6.27□□□□□ -1.41
CASP4-212ENST00000533730 GHRLQ9UBU3 117 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 MAB21L2Q9Y586 359 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 KPTNQ9Y664 436 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 TLN2Q9Y4G6 2542 aa6.27□□□□□ -1.41
CASP4-212ENST00000533730 MTORP42345 2549 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
CASP4-212ENST00000533730 A0A1B0GW55 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 A0A1W2PPK0 400 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 F8VVB4 439 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 F8VWA3 439 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 M0R1W7 72 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 XRCC3O43542 346 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 SFTPBP07988 381 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 UBBP0CG47 229 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L2P0CJ85 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L3P0CJ86 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L4P0CJ87 422 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L5P0CJ88 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L6P0CJ89 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 DUX4L7P0CJ90 424 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 GTF2F2P13984 249 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 OR3A4PP47883 348 aa6.26□□□□□ -1.41
CASP4-212ENST00000533730 KCNJ3P48549 501 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms