RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 HSMCR30P0CW71 290 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 PF4V1P10720 104 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 IL3RAP26951 378 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 GPR50Q13585 617 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 SPHARQ15513 63 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 C6orf183Q5T699 404 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 C10orf99Q6UWK7 81 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 SLC16A12Q6ZSM3 486 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 CEACAM19Q7Z692 300 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 CDH26Q8IXH8 852 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 OR8H3Q8N146 312 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 OR4X2Q8NGF9 303 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 OR1L1Q8NH94 360 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 WIPF2Q8TF74 440 aaPredicted RBP8.31□□□□□ -1.08
CAPN1-225ENST00000533704 NRG4Q8WWG1 115 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 MRPS24Q96EL2 167 aaKnown RBP8.31□□□□□ -1.08
CAPN1-225ENST00000533704 CYYR1Q96J86 154 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 CCDC90BQ9GZT6 254 aa8.31□□□□□ -1.08
CAPN1-225ENST00000533704 RCC2Q9P258 522 aaKnown RBP8.31□□□□□ -1.08
CAPN1-225ENST00000533704 IGHV1-3A0A0C4DH29 117 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 SLC31A2O15432 143 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 HBZP02008 142 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 RCC1P18754 421 aaPredicted RBP8.3□□□□□ -1.08
CAPN1-225ENST00000533704 FUT3P21217 361 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 LOXL3P58215 753 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 CD83Q01151 205 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 HSD17B12Q53GQ0 312 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 LIPKQ5VXJ0 399 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 GLT8D1Q68CQ7 371 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 OR10K2Q6IF99 312 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 THNSL2Q86YJ6 484 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 MS4A15Q8N5U1 240 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 OR52M1Q8NGK5 317 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 UFD1Q92890 307 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 TMEM203Q969S6 136 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 Q96M66 194 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 UQCC2Q9BRT2 126 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 CST11Q9H112 138 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 KCNK15Q9H427 330 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 RAB9BQ9NP90 201 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 KCNIP1Q9NZI2 227 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 LINC00527Q9UJ94 153 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 LSM2Q9Y333 95 aaKnown RBP8.3□□□□□ -1.08
CAPN1-225ENST00000533704 TPRKBQ9Y3C4 175 aa8.3□□□□□ -1.08
CAPN1-225ENST00000533704 PSMB11A5LHX3 300 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A10PA6NDY2 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A18PA6NE21 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A16PA6NEW6 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A20PA6NIJ5 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A7PA6NKC0 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A9PA6NNJ1 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 NCBP2LA6PVI3 153 aaKnown RBP8.29□□□□□ -1.08
CAPN1-225ENST00000533704 SERPINE3A8MV23 424 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A12PA8MX19 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A5PA8MXJ8 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A23PA8MXZ1 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 RGS10O43665 173 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 PDCD6O75340 191 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 PF4P02776 101 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A15PP0C7V4 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A13PP0C7W8 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A14PP0C7W9 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 FAM90A24PP0C7X0 464 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 CD33P20138 364 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 ZNF816Q0VGE8 651 aaPredicted RBP8.29□□□□□ -1.08
CAPN1-225ENST00000533704 BEAN1Q3B7T3 259 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 TCTEX1D4Q5JR98 221 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 RNLSQ5VYX0 342 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 SIGIRRQ6IA17 410 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 TRAT1Q6PIZ9 186 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 C5orf24Q7Z6I8 188 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 LYPD6Q86Y78 171 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 C5orf56Q8N8D9 126 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
CAPN1-225ENST00000533704 NEDD4LQ96PU5 975 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 TAF9BQ9HBM6 251 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 BATF3Q9NR55 127 aa8.29□□□□□ -1.08
CAPN1-225ENST00000533704 TSSC4Q9Y5U2 329 aaPredicted RBP8.29□□□□□ -1.08
CAPN1-225ENST00000533704 CA11O75493 328 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 UBBP0CG47 229 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 SRMP19623 302 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 MYF6P23409 242 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 HTR2CP28335 458 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 GP2P55259 537 aaKnown RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 RPS25P62851 125 aaKnown RBP8.28□□□□□ -1.08
CAPN1-225ENST00000533704 SLC35A2P78381 396 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 IRF3Q14653 427 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 GNMTQ14749 295 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 P2RY14Q15391 338 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 UNQ9370/PRO34162Q6UXP9 181 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 SLC35E3Q7Z769 313 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 OR52L2PQ8NGH6 319 aa8.28□□□□□ -1.08
CAPN1-225ENST00000533704 OR2T10Q8NGZ9 312 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms