RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FAM90A7PA6NKC0 464 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 FAM90A23PA8MXZ1 464 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 PTGES3LE9PB15 166 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 PIN1P1O15428 100 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 FGF16O43320 207 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 MGMTP16455 207 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 FUT3P21217 361 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 LOXL3P58215 753 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 C10orf99Q6UWK7 81 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 C5orf56Q8N8D9 126 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 OR4K15Q8NH41 348 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 TFAP2CQ92754 450 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 UQCC2Q9BRT2 126 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
CPSF1-211ENST00000533492 IGHV3-72A0A0B4J1Y9 119 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 NCBP2LA6PVI3 153 aaKnown RBP12.25□□□□□ -0.45
CPSF1-211ENST00000533492 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 C12orf77C9JDV5 145 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 ANKRD65E5RJM6 399 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 CA11O75493 328 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 GPR50Q13585 617 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 Q3ZCU0 254 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 ACSM3Q53FZ2 586 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 TRAT1Q6PIZ9 186 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 ZNF329Q86UD4 541 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 MS4A15Q8N5U1 240 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 TMEM104Q8NE00 496 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 WFDC9Q8NEX5 89 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 OR2T10Q8NGZ9 312 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 CHPT1Q8WUD6 406 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 MND1Q9BWT6 205 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 CST11Q9H112 138 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 DCLRE1BQ9H816 532 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 NECAP2Q9NVZ3 263 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 FKBP14Q9NWM8 211 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 GHRLQ9UBU3 117 aa12.25□□□□□ -0.45
CPSF1-211ENST00000533492 UBE2QL1A1L167 161 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 GLAP06280 429 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 CDK1P06493 297 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 IGLL1P15814 213 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 VHLP40337 213 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-211ENST00000533492 EBI3Q14213 229 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 TMEM30BQ3MIR4 351 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 FAM53AQ6NSI3 398 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-211ENST00000533492 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 FOXRED2Q8IWF2 684 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 RTN4IP1Q8WWV3 396 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-211ENST00000533492 FAM46BQ96A09 425 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 PHF21AQ96BD5 680 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
CPSF1-211ENST00000533492 KCNIP1Q9NZI2 227 aa12.24□□□□□ -0.45
CPSF1-211ENST00000533492 H0YHG0 523 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 HBZP02008 142 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 RCC1P18754 421 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-211ENST00000533492 CD1BP29016 333 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 SLC35A2P78381 396 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 SLC35B1P78383 322 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 RNLSQ5VYX0 342 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 GLT8D1Q68CQ7 371 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 UNQ9370/PRO34162Q6UXP9 181 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 OR10V1Q8NGI7 309 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 OR1L1Q8NH94 360 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 MRAPQ8TCY5 172 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 Q96M66 194 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-211ENST00000533492 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 TAF9BQ9HBM6 251 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 LINC00527Q9UJ94 153 aa12.23□□□□□ -0.45
CPSF1-211ENST00000533492 SLC31A2O15432 143 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 TXNL1O43396 289 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 PDCD6O75340 191 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 MPIG6BO95866 241 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 MOSP00540 346 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 IGHG2P01859 326 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 UBBP0CG47 229 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 INSL4Q14641 139 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 SPHARQ15513 63 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 MED22Q15528 200 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 RBM48Q5RL73 367 aaKnown RBP12.22□□□□□ -0.45
CPSF1-211ENST00000533492 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 SLC25A48Q6ZT89 311 aaKnown RBP12.22□□□□□ -0.45
CPSF1-211ENST00000533492 IZUMO1Q8IYV9 350 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 GAPTQ8N292 157 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 OR51D1Q8NGF3 324 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 ST6GALNAC6Q969X2 333 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 NEDD4LQ96PU5 975 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
CPSF1-211ENST00000533492 SC5DO75845 299 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 ZNF134P52741 427 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 HSD17B12Q53GQ0 312 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 CT45A1Q5HYN5 189 aa12.21□□□□□ -0.45
CPSF1-211ENST00000533492 FAM27D1Q5T7N8 215 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms