RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF426Q9BUY5 554 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 CDS2O95674 445 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 MGAT2Q10469 447 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 RAB29O14966 203 aa12.86□□□□□ -0.35
PCDHA9-202ENST00000532602 A0A0U1RQV5 110 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 TEX50A0A1B0GTY4 177 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 GAPDHP04406 335 aaKnown RBP12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 MC5RP33032 325 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 CSRP2Q16527 193 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 SLC35B3Q9H1N7 401 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 COL10A1Q03692 680 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 KLRB1Q12918 225 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 C2CD4CQ8TF44 421 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 IL19Q9UHD0 177 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 U3KQ87 197 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 AHCTF1Q8WYP5 2266 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 TRAV8-7A0A075B6U6 113 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 FAM106CPP0CH98 169 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 REG1BP48304 166 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 COX19Q49B96 90 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 LURAP1Q96LR2 239 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 PSG4Q00888 419 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 ADIPOR1Q96A54 375 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 SLC2A9Q9NRM0 540 aa12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
PCDHA9-202ENST00000532602 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 NPY1RP25929 384 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 CEACAM21Q3KPI0 293 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 PRSS27Q9BQR3 290 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 RNF115Q9Y4L5 304 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 PTPRFP10586 1907 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 NEURL1O76050 574 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 CLLU1Q5K131 121 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 ZCCHC14Q8WYQ9 949 aaKnown RBP12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 VWCEQ96DN2 955 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 HDHD3Q9BSH5 251 aaPredicted RBP12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 PIMREGQ9BSJ6 248 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 PITPNC1Q9UKF7 332 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 A0A1B0GU03 582 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 DUXBA0A1W2PPF3 345 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 TMEM33P57088 247 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 TPRX1Q8N7U7 411 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 ABHD1Q96SE0 405 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 SFXN3Q9BWM7 321 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 LCTP09848 1927 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 FAM78BQ5VT40 261 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 CDK2AP1O14519 115 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 CHST1O43916 411 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 CLDN14O95500 239 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 ZNF883P0CG24 379 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 NAT2P11245 290 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 GALR1P47211 349 aa12.84□□□□□ -0.35
PCDHA9-202ENST00000532602 VSIG8P0DPA2 414 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 OR4X1Q8NH49 305 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 PTX4Q96A99 478 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 PGLYRP3Q96LB9 341 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 NINQ8N4C6 2090 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 IGSF23A1L1A6 192 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 PCOLCEQ15113 449 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 C10orf113Q5VZT2 155 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 RNASEKQ6P5S7 137 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 MTCL1Q9Y4B5 1905 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 J3QR06 171 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ARG1P05089 322 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 PMCHP20382 165 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 OR2V2Q96R30 315 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ASAH2BP0C7U1 165 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 SEC11CQ9BY50 192 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 AKIRIN1Q9H9L7 192 aaPredicted RBP12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ZNF236Q9UL36 1845 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 HMSDA8MTL9 139 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ADAP1O75689 374 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 PSG5Q15238 335 aa12.83□□□□□ -0.36
PCDHA9-202ENST00000532602 ZFC3H1O60293 1989 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 CEP290O15078 2479 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 PTP4A3O75365 173 aa12.82□□□□□ -0.36
PCDHA9-202ENST00000532602 DYNLT3P51808 116 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms