RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 CD276Q5ZPR3 534 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 RUSC1-AS1Q66K80 236 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 FAHD2BQ6P2I3 314 aaPredicted RBP6.54□□□□□ -1.36
TRIM49-202ENST00000532501 CNIH2Q6PI25 160 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 GLCCI1Q86VQ1 547 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 RFESDQ8TAC1 157 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 NUDCD2Q8WVJ2 157 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 RBMXL1Q96E39 390 aaKnown RBP6.54□□□□□ -1.36
TRIM49-202ENST00000532501 FAHD2AQ96GK7 314 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 CMSS1Q9BQ75 279 aaKnown RBP6.54□□□□□ -1.36
TRIM49-202ENST00000532501 PARP12Q9H0J9 701 aaKnown RBP6.54□□□□□ -1.36
TRIM49-202ENST00000532501 NCOR1P1Q9H4R4 102 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 RAB9BQ9NP90 201 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 C12orf4Q9NQ89 552 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 ETAA1Q9NY74 926 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 ONECUT1Q9UBC0 465 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 MRPS7Q9Y2R9 242 aaKnown RBP6.54□□□□□ -1.36
TRIM49-202ENST00000532501 DOCK11Q5JSL3 2073 aa6.54□□□□□ -1.36
TRIM49-202ENST00000532501 MEIKINA0A087WXM9 373 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 IGKV1-6A0A0C4DH72 117 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 A0A1W2PQ09 198 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 hADV38S2A0JD32 116 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 TMEM30CPA0ZSE6 113 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 C12orf77C9JDV5 145 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 SULT1C2O00338 296 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 CTDSPLO15194 276 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 IGHV3-7P01780 117 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 MELTFP08582 738 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 PRSS3P35030 304 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 CBX5P45973 191 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 GNMTQ14749 295 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 LTC4SQ16873 150 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 SLC35E4Q6ICL7 350 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 ZNF880Q6PDB4 577 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 TRAT1Q6PIZ9 186 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 MOB1BQ7L9L4 216 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 CCDC190Q86UF4 302 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 BCL6BQ8N143 479 aaPredicted RBP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 ZNF565Q8N9K5 539 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 OR1L1Q8NH94 360 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 C17orf50Q8WW18 174 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 LEAP2Q969E1 77 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 DMRTB1Q96MA1 342 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 WDR12Q9GZL7 423 aaKnown RBP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 C7orf69Q9H7B7 122 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 AUNIPQ9H7T9 357 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 SCPEP1Q9HB40 452 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 CHMP1AQ9HD42 196 aaPredicted RBP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 OR6C3Q9NZP0 311 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 ZNF230Q9UIE0 474 aaPredicted RBP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 DSCAML1Q8TD84 2053 aa6.53□□□□□ -1.36
TRIM49-202ENST00000532501 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
TRIM49-202ENST00000532501 TRGV10A0A0A0MS01 117 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 TRAV40A0A0B4J280 105 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 A0A0G2JMP0 313 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 A0A0X1KG70 313 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 MDFIC2A0A1B0GVS7 189 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 MEIOCA2RUB1 952 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 MEIS3P1A6NDR6 274 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 C17orf98A8MV24 154 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 A8MV72 311 aaPredicted RBP6.52□□□□□ -1.37
TRIM49-202ENST00000532501 HLA-DQB1P01920 261 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 LIPFP07098 398 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 ZNF728P0DKX0 622 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 DTYMKP23919 212 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 COX7A1P24310 79 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 HERPUD1Q15011 391 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 SRSF7Q16629 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRIM49-202ENST00000532501 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 RNASE12Q5GAN4 147 aaKnown RBP6.52□□□□□ -1.37
TRIM49-202ENST00000532501 FAM120AOSQ5T036 256 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 C6orf183Q5T699 404 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 VMO1Q7Z5L0 202 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 ZNF554Q86TJ5 538 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 SNX29P2Q8IUI4 249 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 OR4M2Q8NGB6 313 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 C22orf15Q8WYQ4 148 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 UPRTQ96BW1 309 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 AJUBAQ96IF1 538 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
TRIM49-202ENST00000532501 CALYQ9NYX4 217 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 TRAPPC2LQ9UL33 140 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 KCNS2Q9ULS6 477 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 LINC00312Q9Y6C7 94 aa6.52□□□□□ -1.37
TRIM49-202ENST00000532501 CUBNO60494 3623 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 TRBV6-6A0A0A6YYG2 114 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 CENPVL3A0A0U1RRI6 287 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 hCG_1809904A0A1W2PP81 198 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 A0A1W2PPE2 198 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 A0A1W2PR64 198 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 A0A1W2PRV1 198 aa6.51□□□□□ -1.37
TRIM49-202ENST00000532501 NPIPB11E5RHQ5 1161 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms