RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HIF1ANQ9NWT6 349 aa10.28□□□□□ -0.76
COPB1-208ENST00000532088 ZNF107Q9UII5 783 aaPredicted RBP10.28□□□□□ -0.76
COPB1-208ENST00000532088 MRPS7Q9Y2R9 242 aaKnown RBP10.28□□□□□ -0.76
COPB1-208ENST00000532088 DSCAML1Q8TD84 2053 aa10.28□□□□□ -0.76
COPB1-208ENST00000532088 C15orf65H3BRN8 121 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 SPINT2O43291 252 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 TGFAP01135 160 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 CD99P14209 185 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 NAT1P18440 290 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
COPB1-208ENST00000532088 GLP1RP43220 463 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 HLA-DRB3P79483 266 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 HTD2P86397 168 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 C17orf58Q2M2W7 97 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 Q3ZCU0 254 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 DCAF12L2Q5VW00 463 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 FAM131AQ6UXB0 335 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 Q6ZPA2 131 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 HOGA1Q86XE5 327 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 SNX29P2Q8IUI4 249 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 C11orf42Q8N5U0 333 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 TEX29Q8N6K0 151 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 MAPK1IP1LQ8NDC0 245 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 OR52M1Q8NGK5 317 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 OR4K15Q8NH41 348 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 MRGPRDQ8TDS7 321 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 SMIM4Q8WVI0 70 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 NUDCD2Q8WVJ2 157 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 HDHD3Q9BSH5 251 aaPredicted RBP10.27□□□□□ -0.77
COPB1-208ENST00000532088 METTL8Q9H825 291 aaKnown RBP10.27□□□□□ -0.77
COPB1-208ENST00000532088 ZNF286AQ9HBT8 521 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 MMP26Q9NRE1 261 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 CALYQ9NYX4 217 aa10.27□□□□□ -0.77
COPB1-208ENST00000532088 ELF5Q9UKW6 265 aaPredicted RBP10.27□□□□□ -0.77
COPB1-208ENST00000532088 CREBBPQ92793 2442 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 MYO9AB2RTY4 2548 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 A0A087X0M5 115 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 A0A1B0GX30 115 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 TRDCB7Z8K6 153 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 F2RL2O00254 374 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 SMAD7O15105 426 aaKnown RBP10.26□□□□□ -0.77
COPB1-208ENST00000532088 CTXN2P0C2S0 81 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 MMP9P14780 707 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 RCC1P18754 421 aaPredicted RBP10.26□□□□□ -0.77
COPB1-208ENST00000532088 PRTN3P24158 256 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 ERVFRD-1P60508 538 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 ACTBP60709 375 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 ACTG1P63261 375 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 KRTAP1-1Q07627 177 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 LY6G6FQ5SQ64 297 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 METTL11BQ5VVY1 283 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 STEAP3Q658P3 488 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 OR52W1Q6IF63 320 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 GDPD1Q8N9F7 314 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 OR4A4PQ8NGN8 299 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 CCDC107Q8WV48 283 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 FCAMRQ8WWV6 532 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 CYYR1Q96J86 154 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 TAF9BQ9HBM6 251 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 LPAR2Q9HBW0 351 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 AKIP1Q9NQ31 210 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 TMEM160Q9NX00 188 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 ING3Q9NXR8 418 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 KCNS2Q9ULS6 477 aa10.26□□□□□ -0.77
COPB1-208ENST00000532088 RBMX2Q9Y388 322 aaKnown RBP10.26□□□□□ -0.77
COPB1-208ENST00000532088 ZNF469Q96JG9 3925 aaPredicted RBP10.26□□□□□ -0.77
COPB1-208ENST00000532088 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 IGHV1-8P0DP01 117 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 CCL3L1P16619 93 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 FPR2P25090 351 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 CD34P28906 385 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 RCVRNP35243 200 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 ZNF79Q15937 498 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 NCR3LG1Q68D85 454 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 Q8N7P7 452 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 DTX3Q8N9I9 347 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 SETD6Q8TBK2 473 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 FAM216AQ8WUB2 273 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 DEDD2Q8WXF8 326 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 ARL11Q969Q4 196 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 UPRTQ96BW1 309 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 GALMQ96C23 342 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 CABLES2Q9BTV7 478 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 WDR12Q9GZL7 423 aaKnown RBP10.25□□□□□ -0.77
COPB1-208ENST00000532088 TOLLIPQ9H0E2 274 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 TAS2R8Q9NYW2 309 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 IDI2-AS1Q9NZ38 188 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 MTFP1Q9UDX5 166 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 JPT1Q9UK76 154 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 SESN1Q9Y6P5 492 aa10.25□□□□□ -0.77
COPB1-208ENST00000532088 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.25□□□□□ -0.77
COPB1-208ENST00000532088 MEIOCA2RUB1 952 aa10.24□□□□□ -0.77
COPB1-208ENST00000532088 FABP7O15540 132 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms